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3iyf

From Proteopedia

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Current revision (10:07, 21 February 2024) (edit) (undo)
 
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[[Image:3iyf.png|left|200px]]
 
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==Atomic Model of the Lidless Mm-cpn in the Open State==
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The line below this paragraph, containing "STRUCTURE_3iyf", creates the "Structure Box" on the page.
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<SX load='3iyf' size='340' side='right' viewer='molstar' caption='[[3iyf]], [[Resolution|resolution]] 8.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3iyf]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IYF FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iyf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iyf OCA], [https://pdbe.org/3iyf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iyf RCSB], [https://www.ebi.ac.uk/pdbsum/3iyf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iyf ProSAT]</span></td></tr>
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{{STRUCTURE_3iyf| PDB=3iyf | SCENE= }}
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</table>
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== Function ==
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===Atomic Model of the Lidless Mm-cpn in the Open State===
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[https://www.uniprot.org/uniprot/Q877G8_METMI Q877G8_METMI]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_20090755}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 20090755 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/3iyf_consurf.spt"</scriptWhenChecked>
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-->
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_20090755}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iyf ConSurf].
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[[3iyf]] is a 16 chain structure of [[Heat Shock Proteins]] with sequence from [http://en.wikipedia.org/wiki/Methanococcus_maripaludis Methanococcus maripaludis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IYF OCA].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[Heat Shock Proteins]]
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*[[Chaperonin 3D structures|Chaperonin 3D structures]]
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*[[Heat Shock Protein structures|Heat Shock Protein structures]]
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==Reference==
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__TOC__
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<ref group="xtra">PMID:20090755</ref><references group="xtra"/>
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</SX>
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[[Category: Large Structures]]
[[Category: Methanococcus maripaludis]]
[[Category: Methanococcus maripaludis]]
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[[Category: Baker, M L.]]
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[[Category: Baker ML]]
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[[Category: Chiu, W.]]
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[[Category: Chiu W]]
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[[Category: Dougherty, M.]]
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[[Category: Dougherty M]]
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[[Category: Douglas, N R.]]
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[[Category: Douglas NR]]
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[[Category: Frydman, J.]]
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[[Category: Frydman J]]
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[[Category: Fu, C J.]]
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[[Category: Fu CJ]]
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[[Category: Jakana, J.]]
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[[Category: Jakana J]]
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[[Category: Levitt, M.]]
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[[Category: Levitt M]]
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[[Category: Ludtke, S J.]]
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[[Category: Ludtke SJ]]
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[[Category: Reissmann, S.]]
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[[Category: Reissmann S]]
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[[Category: Schroeder, G.]]
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[[Category: Schroeder G]]
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[[Category: Zhang, J.]]
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[[Category: Zhang J]]
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[[Category: Atp-binding]]
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[[Category: Chaperone]]
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[[Category: Group ii chaperonin]]
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[[Category: Methanococcus maripaludi]]
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[[Category: Mm-cpn]]
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[[Category: Nucleotide-binding]]
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[[Category: Protein folding]]
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[[Category: Single particle reconstruction]]
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Current revision

Atomic Model of the Lidless Mm-cpn in the Open State

3iyf, resolution 8.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

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