This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hhp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3hhp" [edit=sysop:move=sysop])
Current revision (09:59, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3hhp.png|left|200px]]
 
-
<!--
+
==Malate dehydrogenase open conformation==
-
The line below this paragraph, containing "STRUCTURE_3hhp", creates the "Structure Box" on the page.
+
<StructureSection load='3hhp' size='340' side='right'caption='[[3hhp]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hhp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HHP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HHP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hhp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hhp OCA], [https://pdbe.org/3hhp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hhp RCSB], [https://www.ebi.ac.uk/pdbsum/3hhp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hhp ProSAT]</span></td></tr>
-
{{STRUCTURE_3hhp| PDB=3hhp | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Malate dehydrogenase open conformation===
+
[https://www.uniprot.org/uniprot/MDH_ECOLI MDH_ECOLI] Catalyzes the reversible oxidation of malate to oxaloacetate.[HAMAP-Rule:MF_01516]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19724119}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19724119 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hh/3hhp_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_19724119}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hhp ConSurf].
-
[[3hhp]] is a 4 chain structure of [[Malate dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HHP OCA].
+
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Malate dehydrogenase]]
+
*[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:19724119</ref><references group="xtra"/>
+
[[Category: Escherichia coli K-12]]
-
[[Category: Escherichia coli k-12]]
+
[[Category: Large Structures]]
-
[[Category: Malate dehydrogenase]]
+
[[Category: Lamb AL]]
-
[[Category: Lamb, A L.]]
+
[[Category: Meneely KM]]
-
[[Category: Meneely, K M.]]
+
[[Category: Zaitseva J]]
-
[[Category: Zaitseva, J.]]
+
-
[[Category: Citric acid cycle]]
+
-
[[Category: Malate dehydrogenase]]
+
-
[[Category: Mdh]]
+
-
[[Category: Nad]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Tca cycle]]
+
-
[[Category: Tricarboxylic acid cycle]]
+

Current revision

Malate dehydrogenase open conformation

PDB ID 3hhp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3hhp"
Personal tools