1rl6

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[[Image:1rl6.png|left|200px]]
 
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==RIBOSOMAL PROTEIN L6==
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The line below this paragraph, containing "STRUCTURE_1rl6", creates the "Structure Box" on the page.
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<StructureSection load='1rl6' size='340' side='right'caption='[[1rl6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1rl6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RL6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RL6 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rl6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rl6 OCA], [https://pdbe.org/1rl6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rl6 RCSB], [https://www.ebi.ac.uk/pdbsum/1rl6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rl6 ProSAT]</span></td></tr>
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{{STRUCTURE_1rl6| PDB=1rl6 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RL6_GEOSE RL6_GEOSE] It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (By similarity). This protein binds to the 23S rRNA, and is important in its secondary structure.[HAMAP-Rule:MF_01365]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rl6_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rl6 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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In all cells, protein synthesis is coordinated by the ribosome, a large ribonucleoprotein particle that is composed of &gt; 50 distinct protein molecules and several large RNA molecules. Here we present the crystal structure of ribosomal protein L6 from the thermophilic bacterium Bacillus stearothermophilus solved at 2.6 A resolution. L6 contains two domains with almost identical folds, implying that it was created by an ancient gene duplication event. The surface of the molecule displays several likely sites of interaction with other components of the ribosome. The RNA binding sites appear to be localized in the C-terminal domain whereas the N-terminal domain contains the potential sites for protein-protein interactions. The domain structure is homologous with several other ribosomal proteins and to a large family of eukaryotic RNA binding proteins.
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===RIBOSOMAL PROTEIN L6===
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Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein.,Golden BL, Ramakrishnan V, White SW EMBO J. 1993 Dec 15;12(13):4901-8. PMID:8262035<ref>PMID:8262035</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_8262035}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1rl6" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 8262035 is the PubMed ID number.
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{{ABSTRACT_PUBMED_8262035}}
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==About this Structure==
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[[1rl6]] is a 1 chain structure of [[Ribosomal protein L6]] with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RL6 OCA].
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==See Also==
==See Also==
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*[[Ribosomal protein L6]]
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*[[Ribosomal protein L6|Ribosomal protein L6]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:8262035</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
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[[Category: Davies, C.]]
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[[Category: Large Structures]]
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[[Category: Golden, B L.]]
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[[Category: Davies C]]
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[[Category: Ramakrishnan, V.]]
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[[Category: Golden BL]]
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[[Category: White, S W.]]
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[[Category: Ramakrishnan V]]
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[[Category: Alpha/beta protein]]
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[[Category: White SW]]
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[[Category: Gentamicin resistance]]
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[[Category: Ribosomal protein]]
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[[Category: Rna-binding protein]]
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Current revision

RIBOSOMAL PROTEIN L6

PDB ID 1rl6

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