This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1tia

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:39, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1tia.png|left|200px]]
 
-
<!--
+
==AN UNUSUAL BURIED POLAR CLUSTER IN A FAMILY OF FUNGAL LIPASES==
-
The line below this paragraph, containing "STRUCTURE_1tia", creates the "Structure Box" on the page.
+
<StructureSection load='1tia' size='340' side='right'caption='[[1tia]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1tia]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Penicillium_camemberti Penicillium camemberti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TIA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TIA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tia FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tia OCA], [https://pdbe.org/1tia PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tia RCSB], [https://www.ebi.ac.uk/pdbsum/1tia PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tia ProSAT]</span></td></tr>
-
{{STRUCTURE_1tia| PDB=1tia | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===AN UNUSUAL BURIED POLAR CLUSTER IN A FAMILY OF FUNGAL LIPASES===
+
[https://www.uniprot.org/uniprot/MDLA_PENCA MDLA_PENCA] Hydrolyzes mono- and diacylglycerol but not triacylglycerol.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_7656005}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 7656005 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ti/1tia_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_7656005}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tia ConSurf].
-
[[1tia]] is a 1 chain structure of [[Lipase]] with sequence from [http://en.wikipedia.org/wiki/Penicillium_camemberti Penicillium camemberti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TIA OCA].
+
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Lipase]]
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:7656005</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Penicillium camemberti]]
[[Category: Penicillium camemberti]]
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Derewenda U]]
-
[[Category: Derewenda, U.]]
+
[[Category: Derewenda ZS]]
-
[[Category: Derewenda, Z S.]]
+
[[Category: Swenson L]]
-
[[Category: Swenson, L.]]
+
[[Category: Wei Y]]
-
[[Category: Wei, Y.]]
+
[[Category: Yamaguchi S]]
-
[[Category: Yamaguchi, S.]]
+

Current revision

AN UNUSUAL BURIED POLAR CLUSTER IN A FAMILY OF FUNGAL LIPASES

PDB ID 1tia

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools