This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1n5r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1n5r" [edit=sysop:move=sysop])
Current revision (08:46, 10 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1n5r.png|left|200px]]
 
-
<!--
+
==Crystal structure of the mouse acetylcholinesterase-propidium complex==
-
The line below this paragraph, containing "STRUCTURE_1n5r", creates the "Structure Box" on the page.
+
<StructureSection load='1n5r' size='340' side='right'caption='[[1n5r]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1n5r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N5R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N5R FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PRM:3,8-DIAMINO-5[3-(DIETHYLMETHYLAMMONIO)PROPYL]-6-PHENYLPHENANTHRIDINIUM'>PRM</scene></td></tr>
-
{{STRUCTURE_1n5r| PDB=1n5r | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n5r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n5r OCA], [https://pdbe.org/1n5r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n5r RCSB], [https://www.ebi.ac.uk/pdbsum/1n5r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n5r ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the mouse acetylcholinesterase-propidium complex===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/ACES_MOUSE ACES_MOUSE] Terminates signal transduction at the neuromuscular junction by rapid hydrolysis of the acetylcholine released into the synaptic cleft.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12505979}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12505979 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n5/1n5r_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_12505979}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1n5r]] is a 2 chain structure of [[Acetylcholinesterase]] with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N5R OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n5r ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Acetylcholinesterase]]
+
*[[Acetylcholinesterase 3D structures|Acetylcholinesterase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:12505979</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Acetylcholinesterase]]
+
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Bourne, Y.]]
+
[[Category: Bourne Y]]
-
[[Category: Marchot, P.]]
+
[[Category: Marchot P]]
-
[[Category: Radic, Z.]]
+
[[Category: Radic Z]]
-
[[Category: Taylor, P.]]
+
[[Category: Taylor P]]
-
[[Category: Acetylcholinesterase]]
+
-
[[Category: Glycosylated protein]]
+
-
[[Category: Homodimer]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolase fold]]
+
-
[[Category: Serine esterase]]
+

Current revision

Crystal structure of the mouse acetylcholinesterase-propidium complex

PDB ID 1n5r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools