3gla

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3gla" [edit=sysop:move=sysop])
Current revision (07:07, 6 September 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3gla.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the hspA from Xanthomonas axonopodis==
-
The line below this paragraph, containing "STRUCTURE_3gla", creates the "Structure Box" on the page.
+
<StructureSection load='3gla' size='340' side='right'caption='[[3gla]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3gla]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Xanthomonas_citri Xanthomonas citri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GLA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GLA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.64&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_3gla| PDB=3gla | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gla FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gla OCA], [https://pdbe.org/3gla PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gla RCSB], [https://www.ebi.ac.uk/pdbsum/3gla PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gla ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8PNC2_XANAC Q8PNC2_XANAC]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gl/3gla_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gla ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The hspA gene (XAC1151) from Xanthomonas axonopodis pv. citri encodes a protein of 158 amino acids that belongs to the small heat-shock protein (sHSP) family of proteins. These proteins function as molecular chaperones by preventing protein aggregation. The protein was crystallized using the sitting-drop vapour-diffusion method in the presence of ammonium phosphate. X-ray diffraction data were collected to 1.65 angstroms resolution using a synchrotron-radiation source. The crystal belongs to the rhombohedral space group R3, with unit-cell parameters a = b = 128.7, c = 55.3 angstroms. The crystal structure was solved by molecular-replacement methods. Structure refinement is in progress.
-
===Crystal Structure of the hspA from Xanthomonas axonopodis===
+
Crystallization and preliminary X-ray diffraction analysis of XAC1151, a small heat-shock protein from Xanthomonas axonopodis pv. citri belonging to the alpha-crystallin family.,Hilario E, Teixeira EC, Pedroso GA, Bertolini MC, Medrano FJ Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 May 1;62(Pt, 5):446-8. Epub 2006 Apr 12. PMID:16682772<ref>PMID:16682772</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_16682772}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 3gla" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 16682772 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_16682772}}
+
-
 
+
-
==About this Structure==
+
-
[[3gla]] is a 2 chain structure of [[Heat Shock Proteins]] with sequence from [http://en.wikipedia.org/wiki/Xanthomonas_axonopodis_pv._citri Xanthomonas axonopodis pv. citri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GLA OCA].
+
==See Also==
==See Also==
-
*[[Heat Shock Proteins]]
+
*[[Heat Shock Protein structures|Heat Shock Protein structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:16682772</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Xanthomonas axonopodis pv. citri]]
+
</StructureSection>
-
[[Category: Bertolini, M C.]]
+
[[Category: Large Structures]]
-
[[Category: Hilario, E.]]
+
[[Category: Xanthomonas citri]]
-
[[Category: Medrano, F J.]]
+
[[Category: Bertolini MC]]
-
[[Category: Chaperone]]
+
[[Category: Hilario E]]
-
[[Category: High resolution]]
+
[[Category: Medrano FJ]]
-
[[Category: Hspa]]
+
-
[[Category: Shp]]
+
-
[[Category: Shsp]]
+
-
[[Category: Stress response]]
+
-
[[Category: Xanthomonas axonopodi]]
+

Current revision

Crystal Structure of the hspA from Xanthomonas axonopodis

PDB ID 3gla

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3gla"
Personal tools