3dc4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3dc4" [edit=sysop:move=sysop])
Current revision (09:40, 21 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3dc4.png|left|200px]]
 
-
<!--
+
==Crystal structure of the Drosophila kinesin family member NOD in complex with ADP==
-
The line below this paragraph, containing "STRUCTURE_3dc4", creates the "Structure Box" on the page.
+
<StructureSection load='3dc4' size='340' side='right'caption='[[3dc4]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3dc4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DC4 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3dc4| PDB=3dc4 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dc4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dc4 OCA], [https://pdbe.org/3dc4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dc4 RCSB], [https://www.ebi.ac.uk/pdbsum/3dc4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dc4 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the Drosophila kinesin family member NOD in complex with ADP===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/NOD_DROME NOD_DROME] Required for the distributive chromosome segregation of non-exchange chromosomes during meiosis. May be a microtubule motor required to hold distributively "paired" chromosomes at the metaphase plate until anaphase.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_19135893}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19135893 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dc4_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_19135893}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[3dc4]] is a 1 chain structure of [[Kinesin]] with sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DC4 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dc4 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Kinesin]]
+
*[[Kinesin 3D Structures|Kinesin 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:19135893</ref><references group="xtra"/>
+
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
-
[[Category: Cochran, J C.]]
+
[[Category: Large Structures]]
-
[[Category: Kull, F J.]]
+
[[Category: Cochran JC]]
-
[[Category: Mulko, N K.]]
+
[[Category: Kull FJ]]
-
[[Category: Adp]]
+
[[Category: Mulko NK]]
-
[[Category: Atp-binding]]
+
-
[[Category: Atpase]]
+
-
[[Category: Catalytic domain]]
+
-
[[Category: Coiled coil]]
+
-
[[Category: Kinesin]]
+
-
[[Category: Microtubule]]
+
-
[[Category: Motor protein]]
+
-
[[Category: Nucleotide-binding]]
+
-
[[Category: Nucleotide-binding protein]]
+

Current revision

Crystal structure of the Drosophila kinesin family member NOD in complex with ADP

PDB ID 3dc4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools