1ji3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1ji3" [edit=sysop:move=sysop])
Current revision (07:39, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ji3.png|left|200px]]
 
-
<!--
+
==CRYSTAL STRUCTURE OF THE FIRST THERMOSTABLE BACTERIAL LIPASE FROM BACILLUS STEAROTHERMOPHILUS==
-
The line below this paragraph, containing "STRUCTURE_1ji3", creates the "Structure Box" on the page.
+
<StructureSection load='1ji3' size='340' side='right'caption='[[1ji3]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ji3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JI3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JI3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1ji3| PDB=1ji3 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ji3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ji3 OCA], [https://pdbe.org/1ji3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ji3 RCSB], [https://www.ebi.ac.uk/pdbsum/1ji3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ji3 ProSAT]</span></td></tr>
-
 
+
</table>
-
===CRYSTAL STRUCTURE OF THE FIRST THERMOSTABLE BACTERIAL LIPASE FROM BACILLUS STEAROTHERMOPHILUS===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9L6D3_GEOSE Q9L6D3_GEOSE]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_12417199}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12417199 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/1ji3_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_12417199}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1ji3]] is a 2 chain structure of [[Lipase]] with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JI3 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ji3 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Lipase]]
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:12417199</ref><references group="xtra"/>
+
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Large Structures]]
-
[[Category: Fothergill-Gilmore, L A.]]
+
[[Category: Fothergill-Gilmore LA]]
-
[[Category: Sinchaikul, S.]]
+
[[Category: Sinchaikul S]]
-
[[Category: Taylor, P.]]
+
[[Category: Taylor P]]
-
[[Category: Tyndall, J D.A.]]
+
[[Category: Tyndall JDA]]
-
[[Category: Walkinshaw, M D.]]
+
[[Category: Walkinshaw MD]]
-
[[Category: Hydrolase]]
+
-
[[Category: Lipase]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Thermophilic]]
+

Current revision

CRYSTAL STRUCTURE OF THE FIRST THERMOSTABLE BACTERIAL LIPASE FROM BACILLUS STEAROTHERMOPHILUS

PDB ID 1ji3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ji3"
Personal tools