This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2r0q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:19, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2r0q.png|left|200px]]
 
-
<!--
+
==Crystal structure of a serine recombinase- DNA regulatory complex==
-
The line below this paragraph, containing "STRUCTURE_2r0q", creates the "Structure Box" on the page.
+
<StructureSection load='2r0q' size='340' side='right'caption='[[2r0q]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2r0q]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R0Q FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_2r0q| PDB=2r0q | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r0q OCA], [https://pdbe.org/2r0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r0q RCSB], [https://www.ebi.ac.uk/pdbsum/2r0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r0q ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of a serine recombinase- DNA regulatory complex===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/BIN3_STAAU BIN3_STAAU] Potential DNA invertase.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_18439894}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 18439894 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r0/2r0q_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_18439894}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[2r0q]] is a 8 chain structure of [[Resolvase]] with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R0Q OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r0q ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Resolvase]]
+
*[[Resolvase 3D structures|Resolvase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:18439894</ref><references group="xtra"/>
+
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Mouw, K W.]]
+
[[Category: Mouw KW]]
-
[[Category: Rice, P A.]]
+
[[Category: Rice PA]]
-
[[Category: Dna integration]]
+
-
[[Category: Dna invertase]]
+
-
[[Category: Dna recombination]]
+
-
[[Category: Dna-binding protein]]
+
-
[[Category: Plasmid]]
+
-
[[Category: Protein-dna complex]]
+
-
[[Category: Recombination/dna complex]]
+
-
[[Category: Resolvase]]
+
-
[[Category: Site-specific recombinase]]
+
-
[[Category: Transposable element]]
+
-
[[Category: Transposition]]
+

Current revision

Crystal structure of a serine recombinase- DNA regulatory complex

PDB ID 2r0q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2r0q"
Personal tools