2x2p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2x2p" [edit=sysop:move=sysop])
Current revision (10:22, 20 December 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2x2p.png|left|200px]]
 
-
<!--
+
==The flavoprotein NrdI from Bacillus cereus with the initially semiquinone FMN cofactor in an intermediate radiation reduced state==
-
The line below this paragraph, containing "STRUCTURE_2x2p", creates the "Structure Box" on the page.
+
<StructureSection load='2x2p' size='340' side='right'caption='[[2x2p]], [[Resolution|resolution]] 1.15&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2x2p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X2P FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.15&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2x2p| PDB=2x2p | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x2p OCA], [https://pdbe.org/2x2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x2p RCSB], [https://www.ebi.ac.uk/pdbsum/2x2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x2p ProSAT]</span></td></tr>
-
 
+
</table>
-
===THE FLAVOPROTEIN NRDI FROM BACILLUS CEREUS WITH THE INITIALLY SEMIQUINONE FMN COFACTOR IN AN INTERMEDIATE RADIATION REDUCED STATE===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q81G57_BACCR Q81G57_BACCR] Probably involved in ribonucleotide reductase function (By similarity).[SAAS:SAAS004465_004_003068]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[2x2p]] is a 1 chain structure of [[Flavodoxin]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X2P OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x2/2x2p_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x2p ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Flavodoxin]]
+
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:20187055</ref><references group="xtra"/>
+
[[Category: Bacillus cereus ATCC 14579]]
-
[[Category: Bacillus cereus]]
+
[[Category: Large Structures]]
-
[[Category: Andersson, K K.]]
+
[[Category: Andersson KK]]
-
[[Category: Hersleth, H P.]]
+
[[Category: Hersleth HP]]
-
[[Category: Rohr, A K.]]
+
[[Category: Rohr AK]]
-
[[Category: Electron transfer]]
+
-
[[Category: Flavodoxin]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Ribonucleotide reductase]]
+

Current revision

The flavoprotein NrdI from Bacillus cereus with the initially semiquinone FMN cofactor in an intermediate radiation reduced state

PDB ID 2x2p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools