This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1z1x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1z1x" [edit=sysop:move=sysop])
Current revision (08:13, 25 October 2023) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1z1x.png|left|200px]]
 
-
<!--
+
==Crystal Structure of a novel disintegrin from Saw-scaled viper at 3.2 A resolution==
-
The line below this paragraph, containing "STRUCTURE_1z1x", creates the "Structure Box" on the page.
+
<StructureSection load='1z1x' size='340' side='right'caption='[[1z1x]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1z1x]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Echis_carinatus Echis carinatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z1X FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z1x OCA], [https://pdbe.org/1z1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z1x RCSB], [https://www.ebi.ac.uk/pdbsum/1z1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z1x ProSAT]</span></td></tr>
-
{{STRUCTURE_1z1x| PDB=1z1x | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of a novel disintegrin from Saw-scaled viper at 3.2 A resolution===
+
[https://www.uniprot.org/uniprot/DID_ECHCA DID_ECHCA] Inhibits adhesion of cells expressing alpha-4/beta-1 (ITGA4/ITGB1) and alpha-4/beta-7 (ITGA4/ITGB7) integrins to the natural ligands vascular cell adhesion molecule 1 (VCAM-1) and mucosal addressin cell adhesion molecule 1 (MADCAM-1).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
[[1z1x]] is a 1 chain structure of [[Disintegrin]] with sequence from [http://en.wikipedia.org/wiki/Echis_carinatus Echis carinatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z1X OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z1/1z1x_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z1x ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Disintegrin]]
+
*[[Disintegrin|Disintegrin]]
 +
__TOC__
 +
</StructureSection>
[[Category: Echis carinatus]]
[[Category: Echis carinatus]]
-
[[Category: Bilgrami, S.]]
+
[[Category: Large Structures]]
-
[[Category: Ethayathulla, A S.]]
+
[[Category: Bilgrami S]]
-
[[Category: Hassan, M I.]]
+
[[Category: Ethayathulla AS]]
-
[[Category: Singh, B.]]
+
[[Category: Hassan MI]]
-
[[Category: Singh, T P.]]
+
[[Category: Singh B]]
-
[[Category: Yadav, S.]]
+
[[Category: Singh TP]]
-
[[Category: Crystal structure]]
+
[[Category: Yadav S]]
-
[[Category: Disintegrin]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Saw-scaled viper]]
+

Current revision

Crystal Structure of a novel disintegrin from Saw-scaled viper at 3.2 A resolution

PDB ID 1z1x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools