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2v37

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[[Image:2v37.png|left|200px]]
 
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==Solution structure of the N-terminal extracellular domain of human T- cadherin==
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The line below this paragraph, containing "STRUCTURE_2v37", creates the "Structure Box" on the page.
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<StructureSection load='2v37' size='340' side='right'caption='[[2v37]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2v37]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V37 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v37 OCA], [https://pdbe.org/2v37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v37 RCSB], [https://www.ebi.ac.uk/pdbsum/2v37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v37 ProSAT]</span></td></tr>
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</table>
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{{STRUCTURE_2v37| PDB=2v37 | SCENE= }}
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== Function ==
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[[https://www.uniprot.org/uniprot/CAD13_HUMAN CAD13_HUMAN]] Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May act as a negative regulator of neural cell growth.<ref>PMID:10737605</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v3/2v37_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2v37 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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T-cadherin is unique among the family of type I cadherins, because it lacks transmembrane and cytosolic domains, and attaches to the membrane via a glycophosphoinositol anchor. The N-terminal cadherin repeat of T-cadherin (Tcad1) is approximately 30% identical to E-, N-, and other classical cadherins. However, it lacks many amino acids crucial for their adhesive function of classical cadherins. Among others, Trp-2, which is the key residue forming the canonical strand-exchange dimer, is replaced by an isoleucine. Here, we report the NMR structure of the first cadherin repeat of T-cadherin (Tcad1). Tcad1, as other cadherin domains, adopts a beta-barrel structure with a Greek key folding topology. However, Tcad1 is monomeric in the absence and presence of calcium. Accordingly, lle-2 binds into a hydrophobic pocket on the same protomer and participates in an N-terminal beta-sheet. Specific amino acid replacements compared to classical cadherins reduce the size of the binding pocket for residue 2 and alter the backbone conformation and flexibility around residues 5 and 15 as well as many electrostatic interactions. These modifications apparently stabilize the monomeric form and make it less susceptible to a conformational switch upon calcium binding. The absence of a tendency for homoassociation observed by NMR is consistent with electron microscopy and solid-phase binding data of the full T-cadherin ectodomain (Tcad1-5). The apparent low adhesiveness of T-cadherin suggests that it is likely to be involved in reversible and dynamic cellular adhesion-deadhesion processes, which are consistent with its role in cell growth and migration.
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===SOLUTION STRUCTURE OF THE N-TERMINAL EXTRACELLULAR DOMAIN OF HUMAN T-CADHERIN===
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Insights into the low adhesive capacity of human T-cadherin from the NMR structure of Its N-terminal extracellular domain.,Dames SA, Bang E, Haussinger D, Ahrens T, Engel J, Grzesiek S J Biol Chem. 2008 Aug 22;283(34):23485-95. Epub 2008 Jun 10. PMID:18550521<ref>PMID:18550521</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_18550521}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2v37" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 18550521 is the PubMed ID number.
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{{ABSTRACT_PUBMED_18550521}}
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==About this Structure==
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[[2v37]] is a 1 chain structure of [[Cadherin]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V37 OCA].
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==See Also==
==See Also==
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*[[Cadherin]]
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*[[Cadherin 3D structures|Cadherin 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:18550521</ref><references group="xtra"/>
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__TOC__
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[[Category: Homo sapiens]]
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</StructureSection>
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[[Category: Ahrens, T.]]
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[[Category: Human]]
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[[Category: Bang, E J.]]
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[[Category: Large Structures]]
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[[Category: Dames, S A.]]
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[[Category: Ahrens, T]]
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[[Category: Grzesiek, S.]]
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[[Category: Bang, E J]]
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[[Category: Haeussinger, D.]]
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[[Category: Dames, S A]]
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[[Category: Grzesiek, S]]
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[[Category: Haeussinger, D]]
[[Category: Adiponectin receptor]]
[[Category: Adiponectin receptor]]
[[Category: Calcium]]
[[Category: Calcium]]

Current revision

Solution structure of the N-terminal extracellular domain of human T- cadherin

PDB ID 2v37

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