2ysq
From Proteopedia
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| - | [[Image:2ysq.jpg|left|200px]]<br /><applet load="2ysq" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2ysq" /> | ||
| - | '''Solution structure of the SH3 domain from Rho guanine nucleotide exchange factor 9'''<br /> | ||
| - | == | + | ==Solution structure of the SH3 domain from Rho guanine nucleotide exchange factor 9== |
| - | + | <StructureSection load='2ysq' size='340' side='right'caption='[[2ysq]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2ysq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YSQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YSQ FirstGlance]. <br> |
| - | [ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ysq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ysq OCA], [https://pdbe.org/2ysq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ysq RCSB], [https://www.ebi.ac.uk/pdbsum/2ysq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ysq ProSAT], [https://www.topsan.org/Proteins/RSGI/2ysq TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Disease == |
| - | [ | + | [https://www.uniprot.org/uniprot/ARHG9_HUMAN ARHG9_HUMAN] Defects in ARHGEF9 are the cause of pileptic encephalopathy, early infantile, type 8 (EIEE8) [MIM:[https://omim.org/entry/300607 300607]. A disorder characterized by hyperekplexia and early infantile epileptic encephalopathy. Neurologic features include exaggerated startle response, seizures, impaired psychomotor development, and mental retardation. Seizures can be provoked by tactile stimulation or extreme emotion.<ref>PMID:15215304</ref> |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/ARHG9_HUMAN ARHG9_HUMAN] Acts as guanine nucleotide exchange factor (GEF) for CDC42. Promotes formation of GPHN clusters.<ref>PMID:10559246</ref> |
| - | [[ | + | == Evolutionary Conservation == |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ys/2ysq_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ysq ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Rho guanine nucleotide exchange factor 3D structures|Rho guanine nucleotide exchange factor 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Hayashi F]] | ||
| + | [[Category: Qin XR]] | ||
| + | [[Category: Yokoyama S]] | ||
Current revision
Solution structure of the SH3 domain from Rho guanine nucleotide exchange factor 9
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