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3q4d
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3q4d is ON HOLD Authors: Lukk, T., Gerlt, J.A., Nair, S.K. Description: Crystal structure of dipeptide epimerase from Cytophaga hutchinsonii comple...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of dipeptide epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Ala== | |
| + | <StructureSection load='3q4d' size='340' side='right'caption='[[3q4d]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3q4d]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Cytophaga_hutchinsonii_ATCC_33406 Cytophaga hutchinsonii ATCC 33406]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3Q4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3Q4D FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3q4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3q4d OCA], [https://pdbe.org/3q4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3q4d RCSB], [https://www.ebi.ac.uk/pdbsum/3q4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3q4d ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/AAEP_CYTH3 AAEP_CYTH3] Catalyzes the epimerization of D-Ala-D-Ala to D-Ala-L-Ala. Has broad substrate specificity and catalyzes the epimerization of a variety of dipeptides containing an N-terminal Ala followed by a hydrophobic or polar residue, such as Val, Ser and Met (in vitro).<ref>PMID:22392983</ref> | ||
| - | + | ==See Also== | |
| - | + | *[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]] | |
| - | + | *[[Muconate cycloisomerase|Muconate cycloisomerase]] | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Cytophaga hutchinsonii ATCC 33406]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Gerlt JA]] | ||
| + | [[Category: Lukk T]] | ||
| + | [[Category: Nair SK]] | ||
Current revision
Crystal structure of dipeptide epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Ala
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