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3md7

From Proteopedia

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[[Image:3md7.png|left|200px]]
 
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==Crystal structure of a beta-lactamase-like protein bound to GMP from brucella melitensis==
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The line below this paragraph, containing "STRUCTURE_3md7", creates the "Structure Box" on the page.
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<StructureSection load='3md7' size='340' side='right'caption='[[3md7]], [[Resolution|resolution]] 1.27&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3md7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Brucella_abortus_2308 Brucella abortus 2308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MD7 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.27&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5GP:GUANOSINE-5-MONOPHOSPHATE'>5GP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
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{{STRUCTURE_3md7| PDB=3md7 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3md7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3md7 OCA], [https://pdbe.org/3md7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3md7 RCSB], [https://www.ebi.ac.uk/pdbsum/3md7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3md7 ProSAT]</span></td></tr>
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</table>
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===Crystal structure of a beta-lactamase-like protein bound to GMP from brucella melitensis===
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== Function ==
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[https://www.uniprot.org/uniprot/Q2YQ74_BRUA2 Q2YQ74_BRUA2]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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[[3md7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Brucella_abortus Brucella abortus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MD7 OCA].
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Check<jmol>
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[[Category: Brucella abortus]]
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<jmolCheckbox>
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[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/md/3md7_consurf.spt"</scriptWhenChecked>
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[[Category: Beta-lactamase like]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Hydrolase]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Seattle structural genomics center for infectious disease]]
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</jmolCheckbox>
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[[Category: Ssgcid]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3md7 ConSurf].
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[[Category: Structural genomic]]
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Brucella abortus 2308]]
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[[Category: Large Structures]]

Current revision

Crystal structure of a beta-lactamase-like protein bound to GMP from brucella melitensis

PDB ID 3md7

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