This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3mga

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:40, 5 August 2016) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3mga.png|left|200px]]
 
-
<!--
+
==2.4 Angstrom Crystal Structure of Ferric Enterobactin Esterase (fes) from Salmonella typhimurium==
-
The line below this paragraph, containing "STRUCTURE_3mga", creates the "Structure Box" on the page.
+
<StructureSection load='3mga' size='340' side='right' caption='[[3mga]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3mga]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_typhimurium"_loeffler_1892 "bacillus typhimurium" loeffler 1892]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MGA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MGA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
-->
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3mga| PDB=3mga | SCENE= }}
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fes, STM0586 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 "Bacillus typhimurium" Loeffler 1892])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mga FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mga OCA], [http://pdbe.org/3mga PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mga RCSB], [http://www.ebi.ac.uk/pdbsum/3mga PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mga ProSAT]</span></td></tr>
-
===2.4 Angstrom Crystal Structure of Ferric Enterobactin Esterase (fes) from Salmonella typhimurium===
+
</table>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
[[3mga]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MGA OCA].
+
<jmolCheckbox>
-
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mg/3mga_consurf.spt"</scriptWhenChecked>
-
[[Category: Anderson, W F.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Minasov, G.]]
+
</jmolCheckbox>
-
[[Category: Onopriyenko, O.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mga ConSurf].
-
[[Category: Papazisi, L.]]
+
<div style="clear:both"></div>
-
[[Category: Savchenko, A.]]
+
__TOC__
-
[[Category: Skarina, T.]]
+
</StructureSection>
-
[[Category: Wawrzak, Z.]]
+
[[Category: Bacillus typhimurium loeffler 1892]]
-
[[Category: Center for structural genomics of infectious disease]]
+
[[Category: Anderson, W F]]
 +
[[Category: Structural genomic]]
 +
[[Category: Minasov, G]]
 +
[[Category: Onopriyenko, O]]
 +
[[Category: Papazisi, L]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Skarina, T]]
 +
[[Category: Wawrzak, Z]]
[[Category: Csgid]]
[[Category: Csgid]]
[[Category: Ferric enterobactin esterase]]
[[Category: Ferric enterobactin esterase]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]

Current revision

2.4 Angstrom Crystal Structure of Ferric Enterobactin Esterase (fes) from Salmonella typhimurium

3mga, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3mga"
Personal tools