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3opy

From Proteopedia

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[[Image:3opy.png|left|200px]]
 
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==Crystal structure of Pichia pastoris phosphofructokinase in the T-state==
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The line below this paragraph, containing "STRUCTURE_3opy", creates the "Structure Box" on the page.
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<StructureSection load='3opy' size='340' side='right'caption='[[3opy]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3opy]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Komagataella_pastoris_DSMZ_70382 Komagataella pastoris DSMZ 70382]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OPY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OPY FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_3opy| PDB=3opy | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3opy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3opy OCA], [https://pdbe.org/3opy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3opy RCSB], [https://www.ebi.ac.uk/pdbsum/3opy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3opy ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PFKA1_PICPA PFKA1_PICPA] Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.[HAMAP-Rule:MF_03184]<ref>PMID:12125050</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/op/3opy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3opy ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of Pichia pastoris phosphofructokinase in the T-state===
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==See Also==
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*[[Phosphofructokinase 3D structures|Phosphofructokinase 3D structures]]
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_20833871}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 20833871 is the PubMed ID number.
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</StructureSection>
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[[Category: Komagataella pastoris DSMZ 70382]]
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{{ABSTRACT_PUBMED_20833871}}
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[[Category: Large Structures]]
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[[Category: Bruser A]]
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==About this Structure==
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[[Category: Keim A]]
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[[3opy]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Pichia_pastoris Pichia pastoris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OPY OCA].
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[[Category: Kirchberger J]]
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[[Category: Kloos M]]
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==Reference==
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[[Category: Kuettner EB]]
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<ref group="xtra">PMID:20833871</ref><references group="xtra"/>
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[[Category: Marek S]]
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[[Category: 6-phosphofructokinase]]
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[[Category: Schoneberg T]]
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[[Category: Pichia pastoris]]
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[[Category: Strater N]]
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[[Category: Bruser, A.]]
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[[Category: Keim, A.]]
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[[Category: Kirchberger, J.]]
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[[Category: Kloos, M.]]
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[[Category: Kuettner, E B.]]
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[[Category: Marek, S.]]
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[[Category: Schoneberg, T.]]
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[[Category: Strater, N.]]
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Current revision

Crystal structure of Pichia pastoris phosphofructokinase in the T-state

PDB ID 3opy

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