Ribosomal protein L9
From Proteopedia
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| - | + | <StructureSection load='' size='350' side='right' caption='Ribosomal protein L9, (PDB code [[1div]])' scene='Ribosomal_protein_L9/Cv/1'> | |
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| - | [[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. | + | [[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome<ref>PMID:8780779</ref>. |
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| + | </StructureSection> | ||
== 3D Structures of Ribosomal protein L9 == | == 3D Structures of Ribosomal protein L9 == | ||
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| - | === RPL9 === | ||
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| - | [[1div]] – GsRPL9 – ''Geobacillus stearothermophilus''<br /> | ||
| - | [[2hvf]], [[2hba]] – GsRPL9 N-terminal (mutant)<br /> | ||
| - | [[2hbb]] - GsRPL9 N-terminal<br /> | ||
| - | [[1cqu]] - GsRPL9 N-terminal - NMR<br /> | ||
| - | [[2cql]] - hRPL9 N-terminal - human <br /> | ||
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| - | === L9 in 50S subunit+RNA === | ||
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| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br /> | ||
| - | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | ||
| - | [[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br /> | ||
| - | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br /> | ||
| - | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | ||
| - | [[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br /> | ||
| - | [[2rdo]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<br /> | ||
| - | [[3bbo]] - RPL9 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> | ||
| - | [[3iy9]] – RPL9 in 50S subunit – ''Leishmania taretolae''<br /> | ||
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| - | === L9 in 50S subunit + antibiotics === | ||
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| - | [[1xbp]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+thiamulin<br /> | ||
| - | [[1nwx]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+ABT-773<br /> | ||
| - | [[1nwy]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+azithromycin<br /> | ||
| - | [[1sm1]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+quinupristin+dalfopristin<br /> | ||
| - | [[3oh5]], [[3oh7]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+chloramphenicol<br /> | ||
| - | [[3ohj]], [[3ohk]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+erythromycin<br /> | ||
| - | [[3ohz]], [[3oi1]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+azithromycin<br /> | ||
| - | [[3oi3]], [[3oi5]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+telithromycin<br /> | ||
| - | [[2qam]], [[2qao]], [[2qoz]], [[2qp1]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+neomycin<br /> | ||
| - | [[2qba]], [[2qbc]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+gentamicin<br /> | ||
| - | [[3ofc]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+chloramphenicol<br /> | ||
| - | [[3ofz]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+clindamycin<br /> | ||
| - | [[3ofq]], [[3ofr]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+erythromycin<br /> | ||
| - | [[1vt2]], [[3orb]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+CEM-101<br /> | ||
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| - | === L9 in 60S subunit === | ||
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| - | [[3jyw]] - RPL10 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br /> | ||
| - | [[1s1i]] - yRPL10 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast | ||
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| - | === L9 in large + small ribosomal subunit === | ||
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| - | [[2zkr]] - RPL10 in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM – dog | ||
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| - | ===L9 in 50S subunit + ribosome releasing factor (RRF)=== | ||
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| - | [[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+RRF | ||
| - | == | + | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} |
| + | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
| - | + | *Ribosomal protein L9 | |
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| + | **[[1div]] – GsRPL9 – ''Geobacillus stearothermophilus''<br /> | ||
| + | **[[2hvf]], [[2hba]] – GsRPL9 N-terminal (mutant)<br /> | ||
| + | **[[2hbb]] - GsRPL9 N-terminal<br /> | ||
| + | **[[1cqu]] - GsRPL9 N-terminal - NMR<br /> | ||
| + | **[[2cql]] - hRPL9 N-terminal - human <br /> | ||
| - | ===L9 in part of 50S subunit=== | ||
| - | + | *Ribosomal protein L9 in part of 50S subunit | |
| + | **[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM | ||
| + | }} | ||
| + | == References == | ||
| + | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
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3D Structures of Ribosomal protein L9
Updated on 29-September-2017
References
- ↑ Adamski FM, Atkins JF, Gesteland RF. Ribosomal protein L9 interactions with 23 S rRNA: the use of a translational bypass assay to study the effect of amino acid substitutions. J Mol Biol. 1996 Aug 23;261(3):357-71. PMID:8780779 doi:http://dx.doi.org/10.1006/jmbi.1996.0469

