2yqd
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2yqd" size="350" color="white" frame="true" align="right" spinBox="true" caption="2yqd" /> '''Solution structure of the fifth bromodomain ...) |
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| - | [[Image:2yqd.gif|left|200px]]<br /><applet load="2yqd" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2yqd" /> | ||
| - | '''Solution structure of the fifth bromodomain from mouse polybromo-1'''<br /> | ||
| - | == | + | ==Solution structure of the fifth bromodomain from mouse polybromo-1== |
| - | + | <StructureSection load='2yqd' size='340' side='right'caption='[[2yqd]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2yqd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YQD FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yqd OCA], [https://pdbe.org/2yqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yqd RCSB], [https://www.ebi.ac.uk/pdbsum/2yqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yqd ProSAT], [https://www.topsan.org/Proteins/RSGI/2yqd TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PB1_MOUSE PB1_MOUSE] Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology) (By similarity). Acts as a negative regulator of cell proliferation (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yq/2yqd_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yqd ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
| - | + | [[Category: Hayashi F]] | |
| - | [[Category: Hayashi | + | [[Category: Sano R]] |
| - | + | [[Category: Yokoyama S]] | |
| - | [[Category: Sano | + | [[Category: Yoshida M]] |
| - | [[Category: Yokoyama | + | |
| - | [[Category: Yoshida | + | |
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Current revision
Solution structure of the fifth bromodomain from mouse polybromo-1
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