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2yr1
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2yr1" size="350" color="white" frame="true" align="right" spinBox="true" caption="2yr1, resolution 2.0Å" /> '''Crystal Structure of ...) |
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| - | [[Image:2yr1.gif|left|200px]]<br /><applet load="2yr1" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2yr1, resolution 2.0Å" /> | ||
| - | '''Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426'''<br /> | ||
| - | == | + | ==Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426== |
| - | + | <StructureSection load='2yr1' size='340' side='right'caption='[[2yr1]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2yr1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YR1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YR1 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yr1 OCA], [https://pdbe.org/2yr1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yr1 RCSB], [https://www.ebi.ac.uk/pdbsum/2yr1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yr1 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yr1 TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/AROD_GEOKA AROD_GEOKA] Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate.[HAMAP-Rule:MF_00214] |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | [ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yr/2yr1_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[ | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yr1 ConSurf]. | |
| - | + | <div style="clear:both"></div> | |
| - | [ | + | |
| - | [[ | + | |
| - | [ | + | |
| - | + | ==See Also== | |
| + | *[[Dehydroquinase 3D structures|Dehydroquinase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Geobacillus kaustophilus HTA426]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Bessho Y]] | ||
| + | [[Category: Chen L]] | ||
| + | [[Category: Chrzas J]] | ||
| + | [[Category: Fu ZQ]] | ||
| + | [[Category: Kagawa W]] | ||
| + | [[Category: Kurumizaka H]] | ||
| + | [[Category: Wang BC]] | ||
| + | [[Category: Yokoyama S]] | ||
Current revision
Crystal Structure of 3-dehydroquinate dehydratase from Geobacillus kaustophilus HTA426
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