This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2jr1
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2jr1" size="350" color="white" frame="true" align="right" spinBox="true" caption="2jr1" /> '''Solution structure of the DNA binding domain...) |
|||
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2jr1.jpg|left|200px]]<br /><applet load="2jr1" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2jr1" /> | ||
| - | '''Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.'''<br /> | ||
| - | == | + | ==Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.== |
| - | + | <StructureSection load='2jr1' size='340' side='right'caption='[[2jr1]]' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2jr1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Xylella_fastidiosa_9a5c Xylella fastidiosa 9a5c]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JR1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JR1 FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jr1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jr1 OCA], [https://pdbe.org/2jr1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jr1 RCSB], [https://www.ebi.ac.uk/pdbsum/2jr1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jr1 ProSAT]</span></td></tr> |
| - | [[ | + | </table> |
| - | [[Category: | + | == Function == |
| - | [[Category: | + | [https://www.uniprot.org/uniprot/Q9PFC9_XYLFA Q9PFC9_XYLFA] |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/2jr1_consurf.spt"</scriptWhenChecked> | |
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jr1 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Xylella fastidiosa 9a5c]] | ||
| + | [[Category: Rosselli LK]] | ||
| + | [[Category: Sforca ML]] | ||
| + | [[Category: Souza AP]] | ||
| + | [[Category: Zeri AC]] | ||
Current revision
Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from the phytopathogen Xylella fastidiosa.
| |||||||||||
