2eh6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2eh6" size="350" color="white" frame="true" align="right" spinBox="true" caption="2eh6, resolution 1.90&Aring;" /> '''Crystal structure of...)
Current revision (08:40, 25 October 2023) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2eh6.jpg|left|200px]]<br /><applet load="2eh6" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2eh6, resolution 1.90&Aring;" />
 
-
'''Crystal structure of acetylornithine aminotransferase from Aquifex aeolicus VF5'''<br />
 
-
==About this Structure==
+
==Crystal structure of acetylornithine aminotransferase from Aquifex aeolicus VF5==
-
2EH6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus] with <scene name='pdbligand=PLP:'>PLP</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Acetylornithine_transaminase Acetylornithine transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.11 2.6.1.11] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EH6 OCA].
+
<StructureSection load='2eh6' size='340' side='right'caption='[[2eh6]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
[[Category: Acetylornithine transaminase]]
+
== Structural highlights ==
-
[[Category: Aquifex aeolicus]]
+
<table><tr><td colspan='2'>[[2eh6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EH6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EH6 FirstGlance]. <br>
-
[[Category: Single protein]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
[[Category: Kunishima, N.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
-
[[Category: Mizutani, H.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eh6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eh6 OCA], [https://pdbe.org/2eh6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eh6 RCSB], [https://www.ebi.ac.uk/pdbsum/2eh6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eh6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eh6 TOPSAN]</span></td></tr>
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
</table>
-
[[Category: PLP]]
+
== Function ==
-
[[Category: argd]]
+
[https://www.uniprot.org/uniprot/ARGD_AQUAE ARGD_AQUAE]
-
[[Category: national project on protein structural and functional analyses]]
+
== Evolutionary Conservation ==
-
[[Category: nppsfa]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
Check<jmol>
-
[[Category: rsgi]]
+
<jmolCheckbox>
-
[[Category: structural genomics]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2eh6_consurf.spt"</scriptWhenChecked>
-
[[Category: transferase]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eh6 ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:38:16 2008''
+
==See Also==
 +
*[[Aminotransferase 3D structures|Aminotransferase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Aquifex aeolicus VF5]]
 +
[[Category: Large Structures]]
 +
[[Category: Kunishima N]]
 +
[[Category: Mizutani H]]

Current revision

Crystal structure of acetylornithine aminotransferase from Aquifex aeolicus VF5

PDB ID 2eh6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools