2nog

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2nog" size="350" color="white" frame="true" align="right" spinBox="true" caption="2nog, resolution 2.00&Aring;" /> '''SANT Domain Structur...)
Current revision (10:17, 30 August 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2nog.jpg|left|200px]]<br /><applet load="2nog" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2nog, resolution 2.00&Aring;" />
 
-
'''SANT Domain Structure of Xenopus Remodeling Factor ISWI'''<br />
 
-
==About this Structure==
+
==SANT Domain Structure of Xenopus Remodeling Factor ISWI==
-
2NOG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NOG OCA].
+
<StructureSection load='2nog' size='340' side='right'caption='[[2nog]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[2nog]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Xenopus_laevis Xenopus laevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NOG FirstGlance]. <br>
-
Structure of the SANT domain from the Xenopus chromatin remodeling factor ISWI., Horton JR, Elgar SJ, Khan SI, Zhang X, Wade PA, Cheng X, Proteins. 2007 Jun 1;67(4):1198-202. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17377988 17377988]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
[[Category: Single protein]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nog OCA], [https://pdbe.org/2nog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nog RCSB], [https://www.ebi.ac.uk/pdbsum/2nog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nog ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6DFM0_XENLA Q6DFM0_XENLA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/2nog_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nog ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Xenopus laevis]]
[[Category: Xenopus laevis]]
-
[[Category: Cheng, X.]]
+
[[Category: Cheng X]]
-
[[Category: Horton, J.R.]]
+
[[Category: Horton JR]]
-
[[Category: MG]]
+
-
[[Category: dna binding protein]]
+
-
[[Category: sant domain; histone-tail binding module; chromatin binding; helix-turn-helix]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:39:31 2008''
+

Current revision

SANT Domain Structure of Xenopus Remodeling Factor ISWI

PDB ID 2nog

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools