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2r1f
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2r1f" size="350" color="white" frame="true" align="right" spinBox="true" caption="2r1f, resolution 2.21Å" /> '''Crystal structure of...) |
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| - | [[Image:2r1f.jpg|left|200px]]<br /><applet load="2r1f" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2r1f, resolution 2.21Å" /> | ||
| - | '''Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli'''<br /> | ||
| - | == | + | ==Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli== |
| - | + | <StructureSection load='2r1f' size='340' side='right'caption='[[2r1f]], [[Resolution|resolution]] 2.21Å' scene=''> | |
| - | [[Category: | + | == Structural highlights == |
| - | [[Category: | + | <table><tr><td colspan='2'>[[2r1f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1F FirstGlance]. <br> |
| - | [[Category: Almo, S | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [[Category: Burley, S | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Gheyi, T | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yceG, b1097, JW1083 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr> |
| - | [[Category: Lau, C | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [https://pdbe.org/2r1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB], [https://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1f ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2r1f TOPSAN]</span></td></tr> |
| - | [[Category: Maletic, M | + | </table> |
| - | [[Category: Meyer, A | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Patskovsky, Y | + | Check<jmol> |
| - | [[Category: Ramagopal, U | + | <jmolCheckbox> |
| - | [[Category: Rutter, M | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1f_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Sauder, J | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Smith, D | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Toro, R | + | </jmolCheckbox> |
| - | [[Category: Wasserman, S | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r1f ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | + | </StructureSection> | |
| - | + | [[Category: Ecoli]] | |
| - | + | [[Category: Large Structures]] | |
| - | + | [[Category: Almo, S C]] | |
| - | [[Category: | + | [[Category: Burley, S K]] |
| - | [[Category: | + | [[Category: Gheyi, T]] |
| - | + | [[Category: Lau, C]] | |
| - | + | [[Category: Maletic, M]] | |
| - | + | [[Category: Meyer, A J]] | |
| - | + | [[Category: Structural genomic]] | |
| + | [[Category: Patskovsky, Y]] | ||
| + | [[Category: Ramagopal, U A]] | ||
| + | [[Category: Rutter, M]] | ||
| + | [[Category: Sauder, J M]] | ||
| + | [[Category: Smith, D]] | ||
| + | [[Category: Toro, R]] | ||
| + | [[Category: Wasserman, S]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: Pfam 02618]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli
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Categories: Ecoli | Large Structures | Almo, S C | Burley, S K | Gheyi, T | Lau, C | Maletic, M | Meyer, A J | Structural genomic | Patskovsky, Y | Ramagopal, U A | Rutter, M | Sauder, J M | Smith, D | Toro, R | Wasserman, S | NYSGXRC, New York SGX Research Center for Structural Genomics | Pfam 02618 | PSI, Protein structure initiative | Unknown function
