This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pnl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:32, 1 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3pnl.png|left|200px]]
 
-
<!--
+
==Crystal Structure of E.coli Dha kinase DhaK-DhaL complex==
-
The line below this paragraph, containing "STRUCTURE_3pnl", creates the "Structure Box" on the page.
+
<StructureSection load='3pnl' size='340' side='right'caption='[[3pnl]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3pnl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PNL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PNL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3pnl| PDB=3pnl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pnl OCA], [https://pdbe.org/3pnl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pnl RCSB], [https://www.ebi.ac.uk/pdbsum/3pnl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pnl ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of E.coli Dha kinase DhaK-DhaL complex===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/DHAK_ECOLI DHAK_ECOLI] Dihydroxyacetone binding subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. Binds covalently dihydroxyacetone in hemiaminal linkage. Acts also as a corepressor of DhaR by binding to its sensor domain, in the absence of dihydroxyacetone.
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_21209328}}, adds the Publication Abstract to the page
+
[[Category: Escherichia coli K-12]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 21209328 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Cygler M]]
-
{{ABSTRACT_PUBMED_21209328}}
+
[[Category: Ekiel I]]
-
 
+
[[Category: Matte A]]
-
==About this Structure==
+
[[Category: McDonald L]]
-
[[3pnl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PNL OCA].
+
[[Category: Shi R]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:21209328</ref><references group="xtra"/>
+
-
[[Category: Escherichia coli]]
+
-
[[Category: Escherichia coli k-12]]
+
-
[[Category: BSGI, Montreal-Kingston Bacterial Structural Genomics Initiative.]]
+
-
[[Category: Cygler, M.]]
+
-
[[Category: Ekiel, I.]]
+
-
[[Category: Matte, A.]]
+
-
[[Category: McDonald, L.]]
+
-
[[Category: Shi, R.]]
+

Current revision

Crystal Structure of E.coli Dha kinase DhaK-DhaL complex

PDB ID 3pnl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3pnl"
Personal tools