2qnu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2qnu" size="350" color="white" frame="true" align="right" spinBox="true" caption="2qnu, resolution 2.05&Aring;" /> '''Crystal structure of...)
Current revision (08:26, 25 June 2021) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qnu.jpg|left|200px]]<br /><applet load="2qnu" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2qnu, resolution 2.05&Aring;" />
 
-
'''Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution==
-
2QNU is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1] with <scene name='pdbligand=ACT:'>ACT</scene> and <scene name='pdbligand=PGE:'>PGE</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNU OCA].
+
<StructureSection load='2qnu' size='340' side='right'caption='[[2qnu]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2qnu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QNU FirstGlance]. <br>
-
[[Category: Chruszcz, M.]]
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-
[[Category: Cymborowski, M.]]
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[Category: Edwards, A.]]
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA0076 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
-
[[Category: Filippova, E.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qnu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qnu OCA], [https://pdbe.org/2qnu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qnu RCSB], [https://www.ebi.ac.uk/pdbsum/2qnu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qnu ProSAT], [https://www.topsan.org/Proteins/MCSG/2qnu TOPSAN]</span></td></tr>
-
[[Category: Joachimiak, A.]]
+
</table>
-
[[Category: Kagan, O.]]
+
== Evolutionary Conservation ==
-
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Minor, W.]]
+
Check<jmol>
-
[[Category: Savchenko, A.]]
+
<jmolCheckbox>
-
[[Category: Skarina, T.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qn/2qnu_consurf.spt"</scriptWhenChecked>
-
[[Category: ACT]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: PGE]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: mcsg]]
+
</jmolCheckbox>
-
[[Category: midwest center for structural genomics]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qnu ConSurf].
-
[[Category: protein structure initiative]]
+
<div style="clear:both"></div>
-
[[Category: pseudomonas aeruginosa pa01]]
+
__TOC__
-
[[Category: psi-2]]
+
</StructureSection>
-
[[Category: structural genomics]]
+
[[Category: Large Structures]]
-
[[Category: uncharacterized protein]]
+
[[Category: Pseae]]
-
[[Category: unknown function]]
+
[[Category: Chruszcz, M]]
-
 
+
[[Category: Cymborowski, M]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:58:07 2008''
+
[[Category: Edwards, A M]]
 +
[[Category: Filippova, E V]]
 +
[[Category: Joachimiak, A]]
 +
[[Category: Kagan, O]]
 +
[[Category: Structural genomic]]
 +
[[Category: Minor, W]]
 +
[[Category: Savchenko, A]]
 +
[[Category: Skarina, T]]
 +
[[Category: Mcsg]]
 +
[[Category: PSI, Protein structure initiative]]
 +
[[Category: Pseudomonas aeruginosa pa01]]
 +
[[Category: Uncharacterized protein]]
 +
[[Category: Unknown function]]

Current revision

Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution

PDB ID 2qnu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools