2pu9

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[[Image:2pu9.jpg|left|200px]]<br /><applet load="2pu9" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2pu9, resolution 1.650&Aring;" />
 
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'''Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin f'''<br />
 
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==Overview==
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==Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin f==
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Oxygen-evolving photosynthetic organisms regulate carbon metabolism, through a light-dependent redox signalling pathway. Electrons are shuttled, from photosystem I by means of ferredoxin (Fdx) to ferredoxin-thioredoxin, reductase (FTR), which catalyses the two-electron-reduction of chloroplast, thioredoxins (Trxs). These modify target enzyme activities by reduction, regulating carbon flow. FTR is unique in its use of a [4Fe-4S] cluster and, a proximal disulphide bridge in the conversion of a light signal into a, thiol signal. We determined the structures of FTR in both its one- and its, two-electron-reduced intermediate states and of four complexes in the, pathway, including the ternary Fdx-FTR-Trx complex. Here we show that, in, the first complex (Fdx-FTR) of the pathway, the Fdx [2Fe-2S] cluster is, positioned suitably for electron transfer to the FTR [4Fe-4S] centre., After the transfer of one electron, an intermediate is formed in which one, sulphur atom of the FTR active site is free to attack a disulphide bridge, in Trx and the other sulphur atom forms a fifth ligand for an iron atom in, the FTR [4Fe-4S] centre--a unique structure in biology. Fdx then delivers, a second electron that cleaves the FTR-Trx heterodisulphide bond, which, occurs in the Fdx-FTR-Trx complex. In this structure, the redox centres of, the three proteins are aligned to maximize the efficiency of electron, transfer from the Fdx [2Fe-2S] cluster to the active-site disulphide of, Trxs. These results provide a structural framework for understanding the, mechanism of disulphide reduction by an iron-sulphur enzyme and describe, previously unknown interaction networks for both Fdx and Trx (refs 4-6).
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<StructureSection load='2pu9' size='340' side='right'caption='[[2pu9]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2pu9]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea] and [https://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PU9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PU9 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pu9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pu9 OCA], [https://pdbe.org/2pu9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pu9 RCSB], [https://www.ebi.ac.uk/pdbsum/2pu9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pu9 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/FTRC_SYNY3 FTRC_SYNY3] Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.<ref>PMID:10649999</ref> <ref>PMID:14769790</ref> <ref>PMID:17611542</ref> <ref>PMID:19908864</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pu/2pu9_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pu9 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Oxygen-evolving photosynthetic organisms regulate carbon metabolism through a light-dependent redox signalling pathway. Electrons are shuttled from photosystem I by means of ferredoxin (Fdx) to ferredoxin-thioredoxin reductase (FTR), which catalyses the two-electron-reduction of chloroplast thioredoxins (Trxs). These modify target enzyme activities by reduction, regulating carbon flow. FTR is unique in its use of a [4Fe-4S] cluster and a proximal disulphide bridge in the conversion of a light signal into a thiol signal. We determined the structures of FTR in both its one- and its two-electron-reduced intermediate states and of four complexes in the pathway, including the ternary Fdx-FTR-Trx complex. Here we show that, in the first complex (Fdx-FTR) of the pathway, the Fdx [2Fe-2S] cluster is positioned suitably for electron transfer to the FTR [4Fe-4S] centre. After the transfer of one electron, an intermediate is formed in which one sulphur atom of the FTR active site is free to attack a disulphide bridge in Trx and the other sulphur atom forms a fifth ligand for an iron atom in the FTR [4Fe-4S] centre--a unique structure in biology. Fdx then delivers a second electron that cleaves the FTR-Trx heterodisulphide bond, which occurs in the Fdx-FTR-Trx complex. In this structure, the redox centres of the three proteins are aligned to maximize the efficiency of electron transfer from the Fdx [2Fe-2S] cluster to the active-site disulphide of Trxs. These results provide a structural framework for understanding the mechanism of disulphide reduction by an iron-sulphur enzyme and describe previously unknown interaction networks for both Fdx and Trx (refs 4-6).
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==About this Structure==
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Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase.,Dai S, Friemann R, Glauser DA, Bourquin F, Manieri W, Schurmann P, Eklund H Nature. 2007 Jul 5;448(7149):92-6. PMID:17611542<ref>PMID:17611542</ref>
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2PU9 is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea] and [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=SF4:'>SF4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PU9 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase., Dai S, Friemann R, Glauser DA, Bourquin F, Manieri W, Schurmann P, Eklund H, Nature. 2007 Jul 5;448(7149):92-6. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17611542 17611542]
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</div>
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[[Category: Protein complex]]
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<div class="pdbe-citations 2pu9" style="background-color:#fffaf0;"></div>
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[[Category: Spinacia oleracea]]
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[[Category: Synechocystis sp.]]
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[[Category: Dai, S.]]
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[[Category: SF4]]
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[[Category: SO4]]
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[[Category: iron-sulfur]]
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[[Category: protein-protein complex]]
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[[Category: redox]]
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[[Category: thioredoxin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:08:24 2008''
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==See Also==
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*[[Ferredoxin thioredoxin reductase|Ferredoxin thioredoxin reductase]]
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*[[Thioredoxin 3D structures|Thioredoxin 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Spinacia oleracea]]
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[[Category: Synechocystis sp]]
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[[Category: Dai S]]

Current revision

Crystal srtucture of the binary complex between ferredoxin: thioredoxin reductase and thioredoxin f

PDB ID 2pu9

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