This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2qng
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2qng" size="350" color="white" frame="true" align="right" spinBox="true" caption="2qng, resolution 1.40Å" /> '''Crytal structure of ...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2qng.jpg|left|200px]]<br /><applet load="2qng" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2qng, resolution 1.40Å" /> | ||
| - | '''Crytal structure of unknown function protein SAV2460'''<br /> | ||
| - | == | + | ==Crystal structure of unknown function protein SAV2460== |
| - | + | <StructureSection load='2qng' size='340' side='right'caption='[[2qng]], [[Resolution|resolution]] 1.40Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [ | + | <table><tr><td colspan='2'>[[2qng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"streptomyces_avermitilis"_burg_et_al._1979 "streptomyces avermitilis" burg et al. 1979]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QNG FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAV2460 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=33903 "Streptomyces avermitilis" Burg et al. 1979])</td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qng OCA], [https://pdbe.org/2qng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qng RCSB], [https://www.ebi.ac.uk/pdbsum/2qng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qng ProSAT], [https://www.topsan.org/Proteins/MCSG/2qng TOPSAN]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: | + | == Evolutionary Conservation == |
| - | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: | + | Check<jmol> |
| - | [[Category: | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qn/2qng_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qng ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | + | </StructureSection> | |
| - | + | [[Category: Streptomyces avermitilis burg et al. 1979]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chang, C]] | ||
| + | [[Category: Edwards, A M]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Savchenko, A]] | ||
| + | [[Category: Xu, X]] | ||
| + | [[Category: Zheng, H]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Streptomyces avermitili]] | ||
| + | [[Category: Uncharacterized protein]] | ||
| + | [[Category: Unknown function]] | ||
Current revision
Crystal structure of unknown function protein SAV2460
| |||||||||||

