This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2edg
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2edg" size="350" color="white" frame="true" align="right" spinBox="true" caption="2edg" /> '''Solution structure of the GCV_H domain from ...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2edg.jpg|left|200px]]<br /><applet load="2edg" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2edg" /> | ||
| - | '''Solution structure of the GCV_H domain from mouse glycine'''<br /> | ||
| - | == | + | ==Solution structure of the GCV_H domain from mouse glycine== |
| - | + | <StructureSection load='2edg' size='340' side='right'caption='[[2edg]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2edg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EDG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EDG FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2edg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2edg OCA], [https://pdbe.org/2edg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2edg RCSB], [https://www.ebi.ac.uk/pdbsum/2edg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2edg ProSAT], [https://www.topsan.org/Proteins/RSGI/2edg TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/GCSH_MOUSE GCSH_MOUSE] The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/2edg_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2edg ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
| - | + | [[Category: Endo H]] | |
| - | [[Category: Endo | + | [[Category: Hayashi F]] |
| - | [[Category: Hayashi | + | [[Category: Yokoyama S]] |
| - | + | [[Category: Yoshida M]] | |
| - | [[Category: Yokoyama | + | |
| - | [[Category: Yoshida | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution structure of the GCV_H domain from mouse glycine
| |||||||||||
