3qxc
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 3qxc is ON HOLD Authors: Porebski, P.J., Klimecka, M.M., Chruszcz, M., Murzyn, K., Joachimiak, A., Minor, W, Midwest Center for Structural Genomics ...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ATP== | |
| + | <StructureSection load='3qxc' size='340' side='right'caption='[[3qxc]], [[Resolution|resolution]] 1.34Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3qxc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QXC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QXC FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qxc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qxc OCA], [https://pdbe.org/3qxc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qxc RCSB], [https://www.ebi.ac.uk/pdbsum/3qxc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qxc ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/BIOD_HELPY BIOD_HELPY] Catalyzes a mechanistically unusual reaction, the ATP-dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (By similarity).[HAMAP-Rule:MF_00336] | ||
| - | + | ==See Also== | |
| - | + | *[[Dethiobiotin synthetase 3D structures|Dethiobiotin synthetase 3D structures]] | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Helicobacter pylori 26695]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Chruszcz M]] | ||
| + | [[Category: Joachimiak A]] | ||
| + | [[Category: Klimecka MM]] | ||
| + | [[Category: Minor W]] | ||
| + | [[Category: Murzyn K]] | ||
| + | [[Category: Porebski PJ]] | ||
Current revision
Crystal structure of dethiobiotin synthetase (BioD) from Helicobacter pylori complexed with ATP
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