3gfi

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m (Protected "3gfi" [edit=sysop:move=sysop])
Current revision (08:26, 20 March 2024) (edit) (undo)
 
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[[Image:3gfi.png|left|200px]]
 
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==Crystal structure of ST1710 complexed with its promoter DNA==
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The line below this paragraph, containing "STRUCTURE_3gfi", creates the "Structure Box" on the page.
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<StructureSection load='3gfi' size='340' side='right'caption='[[3gfi]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3gfi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii Sulfurisphaera tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GFI FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gfi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfi OCA], [https://pdbe.org/3gfi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gfi RCSB], [https://www.ebi.ac.uk/pdbsum/3gfi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gfi ProSAT], [https://www.topsan.org/Proteins/RSGI/3gfi TOPSAN]</span></td></tr>
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{{STRUCTURE_3gfi| PDB=3gfi | SCENE= }}
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</table>
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== Function ==
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===Crystal structure of ST1710 complexed with its promoter DNA===
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[https://www.uniprot.org/uniprot/Q96ZY1_SULTO Q96ZY1_SULTO]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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<!--
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Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_19509310}}, adds the Publication Abstract to the page
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<jmolCheckbox>
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(as it appears on PubMed at http://www.pubmed.gov), where 19509310 is the PubMed ID number.
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfi_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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{{ABSTRACT_PUBMED_19509310}}
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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==About this Structure==
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gfi ConSurf].
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[[3gfi]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii Sulfolobus tokodaii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFI OCA].
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<div style="clear:both"></div>
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:19509310</ref><ref group="xtra">PMID:17933554</ref><references group="xtra"/>
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[[Category: Large Structures]]
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[[Category: Sulfolobus tokodaii]]
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[[Category: Sulfurisphaera tokodaii]]
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[[Category: Kumarevel, T.]]
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[[Category: Kumarevel T]]
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[[Category: Tanaka, T.]]
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[[Category: Tanaka T]]
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[[Category: Yokoyama, S.]]
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[[Category: Yokoyama S]]
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[[Category: Dna-binding]]
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[[Category: Marr]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Riken structural genomics/proteomics initiative]]
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[[Category: Rsgi]]
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[[Category: St1710]]
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[[Category: Structural genomic]]
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[[Category: Transcription]]
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[[Category: Transcription regulation]]
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[[Category: Transcription regulator]]
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[[Category: Transcription/dna complex]]
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Current revision

Crystal structure of ST1710 complexed with its promoter DNA

PDB ID 3gfi

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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