1e5e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:53, 13 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1e5e.png|left|200px]]
 
-
<!--
+
==METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS IN COMPLEX WITH PROPARGYLGLYCINE==
-
The line below this paragraph, containing "STRUCTURE_1e5e", creates the "Structure Box" on the page.
+
<StructureSection load='1e5e' size='340' side='right'caption='[[1e5e]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1e5e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis_G3 Trichomonas vaginalis G3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E5E FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.18&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PPJ:N-(HYDROXY{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)NORVALINE'>PPJ</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1e5e| PDB=1e5e | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e5e OCA], [https://pdbe.org/1e5e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e5e RCSB], [https://www.ebi.ac.uk/pdbsum/1e5e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e5e ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A2FEV4_TRIV3 A2FEV4_TRIV3]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e5/1e5e_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e5e ConSurf].
 +
<div style="clear:both"></div>
-
===METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS IN COMPLEX WITH PROPARGYLGLYCINE===
+
==See Also==
-
 
+
*[[Methionine gamma-lyase 3D structures|Methionine gamma-lyase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[1e5e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E5E OCA].
+
[[Category: Large Structures]]
-
 
+
[[Category: Trichomonas vaginalis G3]]
-
==Reference==
+
[[Category: Coombs GH]]
-
<ref group="xtra">PMID:9488680</ref><references group="xtra"/>
+
[[Category: Goodall G]]
-
[[Category: Methionine gamma-lyase]]
+
[[Category: Lapthorn AJ]]
-
[[Category: Trichomonas vaginalis]]
+
[[Category: Mottram JC]]
-
[[Category: Coombs, G H.]]
+
-
[[Category: Goodall, G.]]
+
-
[[Category: Lapthorn, A J.]]
+
-
[[Category: Mottram, J C.]]
+
-
[[Category: C-s gamma lyase]]
+
-
[[Category: Methionine biosynthesis]]
+
-
[[Category: Plp-dependent enzyme]]
+
-
[[Category: Propargylglycine]]
+
-
[[Category: Trichomonas vaginali]]
+

Current revision

METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS IN COMPLEX WITH PROPARGYLGLYCINE

PDB ID 1e5e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools