2wkw

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[[Image:2wkw.png|left|200px]]
 
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==Alcaligenes esterase complexed with product analogue==
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The line below this paragraph, containing "STRUCTURE_2wkw", creates the "Structure Box" on the page.
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<StructureSection load='2wkw' size='340' side='right'caption='[[2wkw]], [[Resolution|resolution]] 2.03&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2wkw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenes_sp. Alcaligenes sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WKW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WKW FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.03&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=W22:[(2S)-4-METHYL-3-OXO-2,3,4,5-TETRAHYDRO-1H-1,4-BENZODIAZEPIN-2-YL]ACETIC+ACID'>W22</scene></td></tr>
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{{STRUCTURE_2wkw| PDB=2wkw | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wkw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wkw OCA], [https://pdbe.org/2wkw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wkw RCSB], [https://www.ebi.ac.uk/pdbsum/2wkw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wkw ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7SIA5_ALCSP Q7SIA5_ALCSP]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wk/2wkw_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2wkw ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Background: A novel bacterial esterase that cleaves esters on halogenated cyclic compounds has been isolated from an Alcaligenes species. This esterase 713 is encoded by a 1062 base pair gene. The presence of a leader sequence of 27 amino acids suggests that this enzyme is exported from the cytosol. Esterase 713 has been over-expressed in Agrobacterium without this leader sequence. Its amino acid sequence shows no significant homology to any known protein sequence. Results: The crystal structure of esterase 713 has been determined by multiple isomorphous replacement and refined to 1. 1 A resolution. The subunits of this dimeric enzyme comprise a single domain with an alpha/beta hydrolase fold. The catalytic triad has been identified as Ser206-His298-Glu230. The acidic residue of the catalytic triad (Glu230) is located on the beta6 strand of the alpha/beta hydrolase fold, whereas most other alpha/beta hydrolase enzymes have the acidic residue located on the beta7 strand. The oxyanion hole is formed by the mainchain nitrogens of Cys71 and Gln207 as identified by the binding of a substrate analogue, (S)-7-iodo-2,3,4,5-tetrahydro-4-methyl-3-oxo-1H-1, 4-benzodiazepine-2-acetic acid. Cys71 forms a disulphide bond with the neighbouring Cys72. Conclusions: Despite negligible sequence homology, esterase 713 has structural similarities to a number of other esterases and lipases. Residues of the oxyanion hole were confirmed by structural comparison with Rhizomucor miehei lipase. It is proposed that completion of a functional active site requires the formation of the disulphide bond between adjacent residues Cys71 and Cys72 on export of the esterase into the oxidising environment of the periplasmic space.
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===ALCALIGENES ESTERASE COMPLEXED WITH PRODUCT ANALOGUE===
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The atomic-resolution structure of a novel bacterial esterase.,Bourne PC, Isupov MN, Littlechild JA Structure. 2000 Feb 15;8(2):143-51. PMID:10673440<ref>PMID:10673440</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2wkw" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_10089333}}, adds the Publication Abstract to the page
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*[[Carboxylesterase 3D structures|Carboxylesterase 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 10089333 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_10089333}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Alcaligenes sp]]
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[[2wkw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Alcaligenes_sp. Alcaligenes sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WKW OCA].
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[[Category: Large Structures]]
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[[Category: Bourne PC]]
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==Reference==
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[[Category: Isupov MN]]
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<ref group="xtra">PMID:10089333</ref><ref group="xtra">PMID:10673440</ref><references group="xtra"/>
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[[Category: Littlechild JA]]
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[[Category: Alcaligenes sp.]]
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[[Category: Bourne, P C.]]
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[[Category: Isupov, M N.]]
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[[Category: Littlechild, J A.]]
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[[Category: Alpha/beta hydrolase]]
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[[Category: Atomic resolution]]
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[[Category: Esterase]]
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[[Category: Hydrolase]]
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Current revision

Alcaligenes esterase complexed with product analogue

PDB ID 2wkw

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