2ip6

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m (Protected "2ip6" [edit=sysop:move=sysop])
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[[Image:2ip6.png|left|200px]]
 
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==Crystal structure of PedB==
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The line below this paragraph, containing "STRUCTURE_2ip6", creates the "Structure Box" on the page.
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<StructureSection load='2ip6' size='340' side='right'caption='[[2ip6]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2ip6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pediococcus_pentosaceus Pediococcus pentosaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IP6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IP6 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2ip6| PDB=2ip6 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ip6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ip6 OCA], [https://pdbe.org/2ip6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ip6 RCSB], [https://www.ebi.ac.uk/pdbsum/2ip6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ip6 ProSAT]</span></td></tr>
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</table>
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===Crystal structure of PedB===
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== Function ==
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[https://www.uniprot.org/uniprot/Q79IK2_PEDPE Q79IK2_PEDPE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_17537233}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 17537233 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ip/2ip6_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_17537233}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[2ip6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pediococcus_pentosaceus Pediococcus pentosaceus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IP6 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ip6 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:17537233</ref><ref group="xtra">PMID:16019271</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Pediococcus pentosaceus]]
[[Category: Pediococcus pentosaceus]]
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[[Category: Cha, S S.]]
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[[Category: Cha SS]]
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[[Category: Kang, S O.]]
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[[Category: Kang SO]]
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[[Category: Kim, I K.]]
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[[Category: Kim IK]]
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[[Category: Kim, J H.]]
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[[Category: Kim JH]]
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[[Category: Kim, M K.]]
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[[Category: Kim MK]]
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[[Category: Yim, H S.]]
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[[Category: Yim HS]]
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[[Category: Antimicrobial protein]]
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[[Category: Immunity protein to the pediocin pp-1]]
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Current revision

Crystal structure of PedB

PDB ID 2ip6

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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