2iun

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[[Image:2iun.png|left|200px]]
 
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==Structure of the C-terminal head domain of the avian adenovirus CELO long fibre (P21 crystal form)==
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The line below this paragraph, containing "STRUCTURE_2iun", creates the "Structure Box" on the page.
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<StructureSection load='2iun' size='340' side='right'caption='[[2iun]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2iun]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Fowl_aviadenovirus_1 Fowl aviadenovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IUN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IUN FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_2iun| PDB=2iun | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iun OCA], [https://pdbe.org/2iun PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iun RCSB], [https://www.ebi.ac.uk/pdbsum/2iun PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iun ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SPIK1_ADEG1 SPIK1_ADEG1] Forms spikes that protrude from each vertex of the icosahedral capsid. Interacts with host receptor to provide virion initial attachment to target cell. Fiber proteins are shed during virus entry, when virus is still at the cell surface (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Avian adenovirus CELO (chicken embryo lethal orphan virus, fowl adenovirus type 1) incorporates two different homotrimeric fiber proteins extending from the same penton base: a long fiber (designated fiber 1) and a short fiber (designated fiber 2). The short fibers extend straight outwards from the viral vertices, whilst the long fibers emerge at an angle. In contrast to the short fiber, which binds an unknown avian receptor and has been shown to be essential to the invasiveness of this virus, the long fiber appears to be unnecessary for infection in birds. Both fibers contain a short N-terminal virus-binding peptide, a slender shaft domain and a globular C-terminal head domain; the head domain, by analogy with human adenoviruses, is likely to be involved mainly in receptor binding. This study reports the high-resolution crystal structure of the head domain of the long fiber, solved using single isomorphous replacement (using anomalous signal) and refined against data at 1.6 A (0.16 nm) resolution. The C-terminal globular head domain had an anti-parallel beta-sandwich fold formed by two four-stranded beta-sheets with the same overall topology as human adenovirus fiber heads. The presence in the sequence of characteristic repeats N-terminal to the head domain suggests that the shaft domain contains a triple beta-spiral structure. Implications of the structure for the function and stability of the avian adenovirus long fiber protein are discussed; notably, the structure suggests a different mode of binding to the coxsackievirus and adenovirus receptor from that proposed for the human adenovirus fiber heads.
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===STRUCTURE OF THE C-TERMINAL HEAD DOMAIN OF THE AVIAN ADENOVIRUS CELO LONG FIBRE (P21 CRYSTAL FORM)===
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Structure of the C-terminal head domain of the fowl adenovirus type 1 long fiber.,Guardado-Calvo P, Llamas-Saiz AL, Fox GC, Langlois P, van Raaij MJ J Gen Virol. 2007 Sep;88(Pt 9):2407-16. PMID:17698649<ref>PMID:17698649</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17698649}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2iun" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17698649 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17698649}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Fowl aviadenovirus 1]]
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[[2iun]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Fowl_adenovirus_1 Fowl adenovirus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IUN OCA].
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[[Category: Large Structures]]
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[[Category: Fox GC]]
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==Reference==
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[[Category: Guardado-Calvo P]]
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<ref group="xtra">PMID:17698649</ref><ref group="xtra">PMID:16682773</ref><ref group="xtra">PMID:8627769</ref><ref group="xtra">PMID:7563058</ref><references group="xtra"/>
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[[Category: Llamas-Saiz AL]]
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[[Category: Fowl adenovirus 1]]
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[[Category: Van Raaij MJ]]
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[[Category: Fox, G C.]]
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[[Category: Guardado-Calvo, P.]]
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[[Category: Llamas-Saiz, A L.]]
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[[Category: Raaij, M J.Van.]]
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[[Category: Avian adenovirus]]
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[[Category: Beta-sandwich]]
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[[Category: Fiber protein]]
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[[Category: Receptor-binding]]
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[[Category: Trimeric protein]]
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[[Category: Viral fibre]]
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[[Category: Viral protein]]
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Current revision

Structure of the C-terminal head domain of the avian adenovirus CELO long fibre (P21 crystal form)

PDB ID 2iun

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