1zfl

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[[Image:1zfl.png|left|200px]]
 
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==Solution structure of III-A, the major intermediate in the oxidative folding of leech carboxypeptidase inhibitor==
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The line below this paragraph, containing "STRUCTURE_1zfl", creates the "Structure Box" on the page.
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<StructureSection load='1zfl' size='340' side='right'caption='[[1zfl]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1zfl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hirudo_medicinalis Hirudo medicinalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZFL FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zfl OCA], [https://pdbe.org/1zfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zfl RCSB], [https://www.ebi.ac.uk/pdbsum/1zfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zfl ProSAT]</span></td></tr>
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{{STRUCTURE_1zfl| PDB=1zfl | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MCPI_HIRME MCPI_HIRME] Tightly binding, competitive inhibitor of different types of pancreatic-like carboxypeptidases.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The III-A intermediate constitutes the major rate-determining step in the oxidative folding of leech carboxypeptidase inhibitor (LCI). In this work, III-A has been directly purified from the folding reaction and structurally characterized by NMR spectroscopy. This species, containing three native disulfides, displays a highly native-like structure; however, it lacks some secondary structure elements, making it more flexible than native LCI. III-A represents a structurally determined example of a disulfide-insecure intermediate; direct oxidation of this species to the fully native protein seems to be restricted by the burial of its two free cysteine residues inside a native-like structure. We also show that theoretical approaches based on topological constraints predict with good accuracy the presence of this folding intermediate. Overall, the derived results suggest that, as it occurs with non-disulfide bonded proteins, native-like interactions between segments of secondary structure rather than the crosslinking of disulfide bonds direct the folding of LCI.
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===Solution structure of III-A, the major intermediate in the oxidative folding of leech carboxypeptidase inhibitor===
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NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor.,Arolas JL, D'Silva L, Popowicz GM, Aviles FX, Holak TA, Ventura S Structure. 2005 Aug;13(8):1193-202. PMID:16084391<ref>PMID:16084391</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_16084391}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1zfl" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 16084391 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_16084391}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[1zfl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hirudo_medicinalis Hirudo medicinalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZFL OCA].
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==Reference==
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<ref group="xtra">PMID:16084391</ref><ref group="xtra">PMID:10742178</ref><ref group="xtra">PMID:15226306</ref><references group="xtra"/>
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[[Category: Hirudo medicinalis]]
[[Category: Hirudo medicinalis]]
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[[Category: Arolas, J L.]]
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[[Category: Large Structures]]
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[[Category: Aviles, F X.]]
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[[Category: Arolas JL]]
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[[Category: Holak, T A.]]
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[[Category: Aviles FX]]
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[[Category: Popowicz, G M.]]
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[[Category: D'Silva L]]
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[[Category: Silva, L D.]]
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[[Category: Holak TA]]
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[[Category: Ventura, S.]]
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[[Category: Popowicz GM]]
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[[Category: Carboxypeptidase inhibitor]]
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[[Category: Ventura S]]
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[[Category: Folding intermediate]]
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[[Category: Four-stranded antiparallel beta-sheet]]
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[[Category: Hydrolase inhibitor]]
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[[Category: Oxidative folding]]
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Current revision

Solution structure of III-A, the major intermediate in the oxidative folding of leech carboxypeptidase inhibitor

PDB ID 1zfl

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