2qm1
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2qm1" size="350" color="white" frame="true" align="right" spinBox="true" caption="2qm1, resolution 2.02Å" /> '''Crystal structure of...) |
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| - | [[Image:2qm1.jpg|left|200px]]<br /><applet load="2qm1" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2qm1, resolution 2.02Å" /> | ||
| - | '''Crystal structure of glucokinase from Enterococcus faecalis'''<br /> | ||
| - | == | + | ==Crystal structure of glucokinase from Enterococcus faecalis== |
| - | + | <StructureSection load='2qm1' size='340' side='right'caption='[[2qm1]], [[Resolution|resolution]] 2.02Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2qm1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Entfa Entfa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QM1 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
| - | [ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glcK, EF_2788 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 ENTFA])</td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qm1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm1 OCA], [https://pdbe.org/2qm1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qm1 RCSB], [https://www.ebi.ac.uk/pdbsum/2qm1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qm1 ProSAT], [https://www.topsan.org/Proteins/MCSG/2qm1 TOPSAN]</span></td></tr> |
| - | + | </table> | |
| - | [ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | [[ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qm1_consurf.spt"</scriptWhenChecked> | |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | + | </jmolCheckbox> | |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qm1 ConSurf]. | |
| - | [ | + | <div style="clear:both"></div> |
| - | [[ | + | |
| - | [ | + | |
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Hexokinase 3D structures|Hexokinase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Entfa]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Joachimiak, G]] | ||
| + | [[Category: Kim, Y]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Moy, S]] | ||
| + | [[Category: Alpha-beta structure]] | ||
| + | [[Category: Mcsg]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
| + | [[Category: Putative helix-turn-helix]] | ||
| + | [[Category: Transferase]] | ||
Current revision
Crystal structure of glucokinase from Enterococcus faecalis
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