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2hqr

From Proteopedia

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(New page: 200px<br /><applet load="2hqr" size="350" color="white" frame="true" align="right" spinBox="true" caption="2hqr" /> '''Structure of a Atypical Orphan Response Regu...)
Current revision (06:41, 1 May 2024) (edit) (undo)
 
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[[Image:2hqr.jpg|left|200px]]<br /><applet load="2hqr" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="2hqr" />
 
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'''Structure of a Atypical Orphan Response Regulator Protein Revealed a New Phosphorylation-Independent Regulatory Mechanism'''<br />
 
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==Overview==
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==Structure of a Atypical Orphan Response Regulator Protein Revealed a New Phosphorylation-Independent Regulatory Mechanism==
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Two-component signal transduction systems, commonly found in prokaryotes, typically regulate cellular functions in response to environmental, conditions through a phosphorylation-dependent process. A new type of, response regulator, hp1043 (HP-RR) from Helicobacter pylori, has been, recently identified. HP-RR is essential for cell growth and does not, require the well known phosphorelay scheme. Unphosphorylated HP-RR binds, specifically to its own promoter (P(1043)) and autoregulates the promoter, of the tlpB gene (P(tlpB)). We have determined the structure of HP-RR by, NMR and x-ray crystallography, revealing a symmetrical dimer with two, functional domains. The molecular topology resembles that of the OmpR/PhoB, subfamily, however, the symmetrical dimer is stable even in the, unphosphorylated state. The dimer interface, formed by three secondary, structure elements (alpha4-beta5-alpha5), resembles that of the active, phosphorylated forms of ArcA and PhoB. Several conserved residues of the, HP-RR dimeric interface deviate from the OmpR/PhoB subfamily, although, there are similar salt bridges and hydrophobic patches within the, interface. Our findings reveal how a new type of response regulator, protein could function as a cell growth-associated regulator in the, absence of post-translational modification.
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<StructureSection load='2hqr' size='340' side='right'caption='[[2hqr]]' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[2hqr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_J99 Helicobacter pylori J99]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HQR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HQR FirstGlance]. <br>
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2HQR is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HQR OCA].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hqr OCA], [https://pdbe.org/2hqr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hqr RCSB], [https://www.ebi.ac.uk/pdbsum/2hqr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hqr ProSAT]</span></td></tr>
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==Reference==
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</table>
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Structure of an Atypical Orphan Response Regulator Protein Supports a New Phosphorylation-independent Regulatory Mechanism., Hong E, Lee HM, Ko H, Kim DU, Jeon BY, Jung J, Shin J, Lee SA, Kim Y, Jeon YH, Cheong C, Cho HS, Lee W, J Biol Chem. 2007 Jul 13;282(28):20667-75. Epub 2007 May 9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17491010 17491010]
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== Function ==
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[[Category: Helicobacter pylori]]
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[https://www.uniprot.org/uniprot/Q9ZM42_HELPJ Q9ZM42_HELPJ]
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[[Category: Single protein]]
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== Evolutionary Conservation ==
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[[Category: Hong, E.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Lee, W.]]
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Check<jmol>
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[[Category: h. pylori]]
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<jmolCheckbox>
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[[Category: phosporylation-independent response regulator]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/2hqr_consurf.spt"</scriptWhenChecked>
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[[Category: symmetric dimer]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:22:47 2008''
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hqr ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Helicobacter pylori J99]]
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[[Category: Large Structures]]
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[[Category: Hong E]]
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[[Category: Lee W]]

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Structure of a Atypical Orphan Response Regulator Protein Revealed a New Phosphorylation-Independent Regulatory Mechanism

PDB ID 2hqr

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