2igu

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[[Image:2igu.png|left|200px]]
 
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==Deamidated analogue of ImI Conotoxin==
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The line below this paragraph, containing "STRUCTURE_2igu", creates the "Structure Box" on the page.
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<StructureSection load='2igu' size='340' side='right'caption='[[2igu]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2igu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Conus_imperialis Conus imperialis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IGU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IGU FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 14 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2igu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2igu OCA], [https://pdbe.org/2igu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2igu RCSB], [https://www.ebi.ac.uk/pdbsum/2igu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2igu ProSAT]</span></td></tr>
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{{STRUCTURE_2igu| PDB=2igu | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CA1_CONIM CA1_CONIM] Alpha-conotoxins act on postsynaptic membranes, they bind to the nicotinic acetylcholine receptors (nAChR) and thus inhibit them. This toxin blocks mammalian neuronal nAChRs (alpha-3/beta-2 > alpha-7 > alpha-3/beta-4). Has no effect on nAChRs composed of alpha-2/beta-2, alpha-3/beta-2, alpha-4/beta-2, alpha-2/beta-4, alpha-3/beta-4, or alpha-4/beta-4 subunits. Acts voltage-independently. Is highly active against the neuromuscular receptor in frog.<ref>PMID:8206995</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Alpha-conotoxins isolated from Conus venoms contain 11-19 residues and preferentially fold into the globular conformation that possesses a specific disulfide pairing pattern (C1-3, C2-4). We and others isolated a new family of chi-conotoxins (also called lambda conotoxins) with the conserved cysteine framework of alpha-conotoxins but with alternative disulfide pairing (C1-4, C2-3) resulting in the ribbon conformation. In both families, disulfide pairing and hence folding are important for their biological potency. By comparing the structural differences, we identified potential structural determinants responsible for the folding tendencies of these conotoxins. We examined the role of conserved proline in the first intercysteine loop and the conserved C-terminal amide on folding patterns of synthetic analogues of ImI conotoxin by comparing the isoforms with the regiospecifically synthesized conformers. Deamidation at the C-terminus and substitution of proline in the first intercysteine loop switch the folding pattern from the globular form of alpha-conotoxins to the ribbon form of chi/lambda-conotoxins. The findings are corroborated by reciprocal folding of CMrVIA chi/lambda-conotoxins. Substitution of Lys-6 from the first intercysteine loop of CMrVIA conotoxin with proline, as well as the inclusion of an amidated C-terminal shifted the folding preference of CMrVIA conotoxin from its native ribbon conformation toward the globular conformation. Binding assays of ImI conotoxin analogues with Aplysia and Bulinus acetylcholine binding protein indicate that both these substitutions and their consequent conformational change substantially impact the binding affinity of ImI conotoxin. These results strongly indicate that the first intercysteine loop proline and C-terminal amidation act as conformational switches in alpha- and chi/lambda-conotoxins.
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===Deamidated analogue of ImI Conotoxin===
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Protein folding determinants: structural features determining alternative disulfide pairing in alpha- and chi/lambda-conotoxins.,Kang TS, Radic Z, Talley TT, Jois SD, Taylor P, Kini RM Biochemistry. 2007 Mar 20;46(11):3338-55. Epub 2007 Feb 22. PMID:17315952<ref>PMID:17315952</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_17315952}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2igu" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 17315952 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_17315952}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Conus imperialis]]
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[[2igu]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IGU OCA].
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[[Category: Large Structures]]
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[[Category: Kang TS]]
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==Reference==
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[[Category: Kini RM]]
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<ref group="xtra">PMID:17315952</ref><ref group="xtra">PMID:16161170</ref><references group="xtra"/>
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[[Category: Kang, T S.]]
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[[Category: Kini, R M.]]
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[[Category: Conotoxin]]
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[[Category: Disulfide linkage]]
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[[Category: Nmr]]
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[[Category: Ribbon conformation]]
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Current revision

Deamidated analogue of ImI Conotoxin

PDB ID 2igu

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