2r59

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2r59" [edit=sysop:move=sysop])
Current revision (09:19, 21 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2r59.png|left|200px]]
 
-
<!--
+
==Leukotriene A4 hydrolase complexed with inhibitor RB3041==
-
The line below this paragraph, containing "STRUCTURE_2r59", creates the "Structure Box" on the page.
+
<StructureSection load='2r59' size='340' side='right'caption='[[2r59]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2r59]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R59 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R59 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=PH0:N-{(2S)-3-[(R)-[(1R)-1-AMINO-2-PHENYLETHYL](HYDROXY)PHOSPHORYL]-2-BENZYLPROPANOYL}-L-PHENYLALANINE'>PH0</scene>, <scene name='pdbligand=YB:YTTERBIUM+(III)+ION'>YB</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2r59| PDB=2r59 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r59 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r59 OCA], [https://pdbe.org/2r59 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r59 RCSB], [https://www.ebi.ac.uk/pdbsum/2r59 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r59 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LKHA4_HUMAN LKHA4_HUMAN] Epoxide hydrolase that catalyzes the final step in the biosynthesis of the proinflammatory mediator leukotriene B4. Has also aminopeptidase activity.<ref>PMID:1897988</ref> <ref>PMID:1975494</ref> <ref>PMID:2244921</ref> <ref>PMID:12207002</ref> <ref>PMID:11917124</ref> <ref>PMID:15078870</ref> <ref>PMID:18804029</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r5/2r59_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r59 ConSurf].
 +
<div style="clear:both"></div>
-
===Leukotriene A4 hydrolase complexed with inhibitor RB3041===
+
==See Also==
-
 
+
*[[Leukotriene A4 Hydrolase|Leukotriene A4 Hydrolase]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18804029}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 18804029 is the PubMed ID number.
+
</StructureSection>
-
-->
+
-
{{ABSTRACT_PUBMED_18804029}}
+
-
 
+
-
==About this Structure==
+
-
[[2r59]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R59 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:18804029</ref><ref group="xtra">PMID:17357161</ref><ref group="xtra">PMID:15078870</ref><ref group="xtra">PMID:11675384</ref><ref group="xtra">PMID:11917124</ref><ref group="xtra">PMID:11175901</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Fournie-Zaluski, M C.]]
+
[[Category: Large Structures]]
-
[[Category: Haeggstrom, J Z.]]
+
[[Category: Fournie-Zaluski MC]]
-
[[Category: Muroya, A.]]
+
[[Category: Haeggstrom JZ]]
-
[[Category: Roques, B P.]]
+
[[Category: Muroya A]]
-
[[Category: Tholander, F.]]
+
[[Category: Roques BP]]
-
[[Category: Thunnissen, M.]]
+
[[Category: Tholander F]]
-
[[Category: Alternative splicing]]
+
[[Category: Thunnissen M]]
-
[[Category: Analogue peptide]]
+
-
[[Category: Cytoplasm]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Hydrolysis]]
+
-
[[Category: Leukotriene biosynthesis]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Metalloprotease]]
+
-
[[Category: Multifunctional enzyme]]
+
-
[[Category: Protease]]
+
-
[[Category: Transition state]]
+
-
[[Category: Zinc]]
+

Current revision

Leukotriene A4 hydrolase complexed with inhibitor RB3041

PDB ID 2r59

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools