3aj2

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[[Image:3aj2.png|left|200px]]
 
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==The structure of AxCeSD octamer (C-terminal HIS-tag) from Acetobacter xylinum==
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The line below this paragraph, containing "STRUCTURE_3aj2", creates the "Structure Box" on the page.
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<StructureSection load='3aj2' size='340' side='right'caption='[[3aj2]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3aj2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Komagataeibacter_xylinus Komagataeibacter xylinus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2z9f 2z9f]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AJ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AJ2 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3aj2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3aj2 OCA], [https://pdbe.org/3aj2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3aj2 RCSB], [https://www.ebi.ac.uk/pdbsum/3aj2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3aj2 ProSAT]</span></td></tr>
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{{STRUCTURE_3aj2| PDB=3aj2 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/ACSD_KOMXY ACSD_KOMXY] May have a major role in the perfection of crystallization, involved either in the pore structure itself or in the organization of the pores within the linear array of terminal synthesizing complexes (TCs).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aj/3aj2_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3aj2 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The cellulose synthesizing terminal complex consisting of subunits A, B, C, and D in Acetobacter xylinum spans the outer and inner cell membranes to synthesize and extrude glucan chains, which are assembled into subelementary fibrils and further into a ribbon. We determined the structures of subunit D (AxCeSD/AxBcsD) with both N- and C-terminal His(6) tags, and in complex with cellopentaose. The structure of AxCeSD shows an exquisite cylinder shape (height: approximately 65 A, outer diameter: approximately 90 A, and inner diameter: approximately 25 A) with a right-hand twisted dimer interface on the cylinder wall, formed by octamer as a functional unit. All N termini of the octamer are positioned inside the AxCeSD cylinder and create four passageways. The location of cellopentaoses in the complex structure suggests that four glucan chains are extruded individually through their own passageway along the dimer interface in a twisted manner. The complex structure also shows that the N-terminal loop, especially residue Lys6, seems to be important for cellulose production, as confirmed by in vivo assay using mutant cells with axcesD gene disruption and N-terminus truncation. Taking all results together, a model of the bacterial terminal complex is discussed.
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===The structure of AxCeSD octamer (C-terminal HIS-tag) from Acetobacter xylinum===
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Structure of bacterial cellulose synthase subunit D octamer with four inner passageways.,Hu SQ, Gao YG, Tajima K, Sunagawa N, Zhou Y, Kawano S, Fujiwara T, Yoda T, Shimura D, Satoh Y, Munekata M, Tanaka I, Yao M Proc Natl Acad Sci U S A. 2010 Oct 19;107(42):17957-61. Epub 2010 Oct 4. PMID:20921370<ref>PMID:20921370</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20921370}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 3aj2" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20921370 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_20921370}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Komagataeibacter xylinus]]
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[[3aj2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Gluconacetobacter_xylinus Gluconacetobacter xylinus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2z9f 2z9f]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AJ2 OCA].
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[[Category: Large Structures]]
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[[Category: Hu SQ]]
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==Reference==
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[[Category: Tajima K]]
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<ref group="xtra">PMID:20921370</ref><ref group="xtra">PMID:18221022</ref><references group="xtra"/>
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[[Category: Tanaka I]]
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[[Category: Gluconacetobacter xylinus]]
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[[Category: Yao M]]
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[[Category: Hu, S Q.]]
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[[Category: Zhou Y]]
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[[Category: Tajima, K.]]
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[[Category: Tanaka, I.]]
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[[Category: Yao, M.]]
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[[Category: Zhou, Y.]]
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[[Category: Alpha and beta fold]]
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[[Category: Biosynthetic protein]]
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[[Category: Cellulose biosynthesis]]
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[[Category: Molecule ring]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Octamer]]
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[[Category: Structural genomic]]
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[[Category: Tetramer of dimer]]
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Current revision

The structure of AxCeSD octamer (C-terminal HIS-tag) from Acetobacter xylinum

PDB ID 3aj2

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