2hoq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2hoq" size="350" color="white" frame="true" align="right" spinBox="true" caption="2hoq, resolution 1.70&Aring;" /> '''Crystal structure of...)
Current revision (13:52, 13 March 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hoq.jpg|left|200px]]<br /><applet load="2hoq" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2hoq, resolution 1.70&Aring;" />
 
-
'''Crystal structure of the probable haloacid dehalogenase (PH1655) from pyrococcus horikoshii OT3'''<br />
 
-
==About this Structure==
+
==Crystal structure of the probable haloacid dehalogenase (PH1655) from pyrococcus horikoshii OT3==
-
2HOQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOQ OCA].
+
<StructureSection load='2hoq' size='340' side='right'caption='[[2hoq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
[[Category: Pyrococcus horikoshii]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2hoq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HOQ FirstGlance]. <br>
-
[[Category: Jeyakanthan, J.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hoq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hoq OCA], [https://pdbe.org/2hoq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hoq RCSB], [https://www.ebi.ac.uk/pdbsum/2hoq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hoq ProSAT], [https://www.topsan.org/Proteins/RSGI/2hoq TOPSAN]</span></td></tr>
-
[[Category: Shinkai, A.]]
+
</table>
-
[[Category: Shiro, Y.]]
+
== Function ==
-
[[Category: Yokoyama, S.]]
+
[https://www.uniprot.org/uniprot/G3PP_PYRHO G3PP_PYRHO] Catalyzes the dephosphorylation of D,L-glyceraldehyde 3-phosphate in vitro.[UniProtKB:Q58832]
-
[[Category: haloacid dehalogenase]]
+
== Evolutionary Conservation ==
-
[[Category: national project on protein structural and functional analyses]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: nppsfa]]
+
Check<jmol>
-
[[Category: riken structural genomics/proteomics initiative]]
+
<jmolCheckbox>
-
[[Category: rsgi]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ho/2hoq_consurf.spt"</scriptWhenChecked>
-
[[Category: structural genomics]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 14:31:09 2008''
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hoq ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus horikoshii OT3]]
 +
[[Category: Jeyakanthan J]]
 +
[[Category: Shinkai A]]
 +
[[Category: Shiro Y]]
 +
[[Category: Yokoyama S]]

Current revision

Crystal structure of the probable haloacid dehalogenase (PH1655) from pyrococcus horikoshii OT3

PDB ID 2hoq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools