This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1zk0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:05, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1zk0.png|left|200px]]
 
-
<!--
+
==Structure of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis in complex with phenylethanol and NADH==
-
The line below this paragraph, containing "STRUCTURE_1zk0", creates the "Structure Box" on the page.
+
<StructureSection load='1zk0' size='340' side='right'caption='[[1zk0]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1zk0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Levilactobacillus_brevis Levilactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZK0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZK0 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=SS2:(1R)-1-PHENYLETHANOL'>SS2</scene></td></tr>
-
{{STRUCTURE_1zk0| PDB=1zk0 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zk0 OCA], [https://pdbe.org/1zk0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zk0 RCSB], [https://www.ebi.ac.uk/pdbsum/1zk0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zk0 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q84EX5_LEVBR Q84EX5_LEVBR]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zk/1zk0_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zk0 ConSurf].
 +
<div style="clear:both"></div>
-
===Structure of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis in complex with phenylethanol and NADH===
+
==See Also==
-
 
+
*[[Alcohol dehydrogenase 3D structures|Alcohol dehydrogenase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15896805}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 15896805 is the PubMed ID number.
+
[[Category: Levilactobacillus brevis]]
-
-->
+
[[Category: Hummel W]]
-
{{ABSTRACT_PUBMED_15896805}}
+
[[Category: Muller J]]
-
 
+
[[Category: Niefind K]]
-
==About this Structure==
+
[[Category: Riebel B]]
-
[[1zk0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_brevis Lactobacillus brevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZK0 OCA].
+
[[Category: Schlieben NH]]
-
 
+
[[Category: Schomburg D]]
-
==Reference==
+
-
<ref group="xtra">PMID:15896805</ref><ref group="xtra">PMID:12628239</ref><ref group="xtra">PMID:11092950</ref><references group="xtra"/>
+
-
[[Category: Lactobacillus brevis]]
+
-
[[Category: Hummel, W.]]
+
-
[[Category: Muller, J.]]
+
-
[[Category: Niefind, K.]]
+
-
[[Category: Riebel, B.]]
+
-
[[Category: Schlieben, N H.]]
+
-
[[Category: Schomburg, D.]]
+
-
[[Category: Magnesium dependence]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: R-specific alcohol dehydrogenase]]
+
-
[[Category: Short chain reductases/dehydrogenase]]
+

Current revision

Structure of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis in complex with phenylethanol and NADH

PDB ID 1zk0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1zk0"
Personal tools