3dvw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3dvw" [edit=sysop:move=sysop])
Current revision (09:43, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3dvw.png|left|200px]]
 
-
<!--
+
==Crystal structure of reduced DsbA1 from Neisseria meningitidis==
-
The line below this paragraph, containing "STRUCTURE_3dvw", creates the "Structure Box" on the page.
+
<StructureSection load='3dvw' size='340' side='right'caption='[[3dvw]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3dvw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DVW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dvw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dvw OCA], [https://pdbe.org/3dvw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dvw RCSB], [https://www.ebi.ac.uk/pdbsum/3dvw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dvw ProSAT]</span></td></tr>
-
{{STRUCTURE_3dvw| PDB=3dvw | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of reduced DsbA1 from Neisseria meningitidis===
+
[https://www.uniprot.org/uniprot/Q9K189_NEIMB Q9K189_NEIMB]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19631659}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19631659 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dv/3dvw_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_19631659}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dvw ConSurf].
-
[[3dvw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_mc58 Neisseria meningitidis mc58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DVW OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:19631659</ref><ref group="xtra">PMID:18259062</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Neisseria meningitidis mc58]]
+
[[Category: Neisseria meningitidis MC58]]
-
[[Category: Lafaye, C.]]
+
[[Category: Lafaye C]]
-
[[Category: Serre, L.]]
+
[[Category: Serre L]]
-
[[Category: Disulfide bond]]
+
-
[[Category: Dsba]]
+
-
[[Category: Neisseria]]
+
-
[[Category: Thiol-oxidoreductase]]
+

Current revision

Crystal structure of reduced DsbA1 from Neisseria meningitidis

PDB ID 3dvw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3dvw"
Personal tools