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1gkp

From Proteopedia

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[[Image:1gkp.png|left|200px]]
 
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<!--
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==D-Hydantoinase (Dihydropyrimidinase) from Thermus sp. in space group C2221==
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The line below this paragraph, containing "STRUCTURE_1gkp", creates the "Structure Box" on the page.
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<StructureSection load='1gkp' size='340' side='right'caption='[[1gkp]], [[Resolution|resolution]] 1.29&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1gkp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_sp. Thermus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GKP FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.295&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_1gkp| PDB=1gkp | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gkp OCA], [https://pdbe.org/1gkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gkp RCSB], [https://www.ebi.ac.uk/pdbsum/1gkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gkp ProSAT]</span></td></tr>
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</table>
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===D-HYDANTOINASE (DIHYDROPYRIMIDINASE) FROM THERMUS SP. IN SPACE GROUP C2221===
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== Function ==
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[https://www.uniprot.org/uniprot/Q7SIE9_THESP Q7SIE9_THESP]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12079340}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 12079340 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/1gkp_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_12079340}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[1gkp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_sp. Thermus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GKP OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gkp ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:12079340</ref><ref group="xtra">PMID:10957635</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Dihydropyrimidinase]]
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[[Category: Large Structures]]
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[[Category: Thermus sp.]]
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[[Category: Thermus sp]]
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[[Category: Abendroth, J.]]
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[[Category: Abendroth J]]
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[[Category: Niefind, K.]]
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[[Category: Niefind K]]
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[[Category: Schomburg, D.]]
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[[Category: Schomburg D]]
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[[Category: Cyclic amidase]]
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[[Category: Dihydropyrimidinase]]
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[[Category: Hydantoinase]]
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[[Category: Hydrolase]]
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Current revision

D-Hydantoinase (Dihydropyrimidinase) from Thermus sp. in space group C2221

PDB ID 1gkp

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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