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2z8f

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[[Image:2z8f.png|left|200px]]
 
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==The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-tetraose==
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The line below this paragraph, containing "STRUCTURE_2z8f", creates the "Structure Box" on the page.
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<StructureSection load='2z8f' size='340' side='right'caption='[[2z8f]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2z8f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bifidobacterium_longum Bifidobacterium longum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z8F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z8F FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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{{STRUCTURE_2z8f| PDB=2z8f | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z8f OCA], [https://pdbe.org/2z8f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z8f RCSB], [https://www.ebi.ac.uk/pdbsum/2z8f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z8f ProSAT]</span></td></tr>
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</table>
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===The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-tetraose===
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== Function ==
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[https://www.uniprot.org/uniprot/A8W790_BIFLN A8W790_BIFLN]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_18332142}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 18332142 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z8/2z8f_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_18332142}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[2z8f]] is a 2 chain structure of [[ABC transporter]] with sequence from [http://en.wikipedia.org/wiki/Bifidobacterium_longum Bifidobacterium longum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z8F OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z8f ConSurf].
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<div style="clear:both"></div>
==See Also==
==See Also==
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*[[ABC transporter]]
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*[[ABC transporter 3D structures|ABC transporter 3D structures]]
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__TOC__
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==Reference==
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</StructureSection>
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<ref group="xtra">PMID:18332142</ref><ref group="xtra">PMID:17768345</ref><references group="xtra"/>
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[[Category: Bifidobacterium longum]]
[[Category: Bifidobacterium longum]]
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[[Category: Fushinobu, S.]]
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[[Category: Large Structures]]
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[[Category: Katayama, T.]]
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[[Category: Fushinobu S]]
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[[Category: Suzuki, R.]]
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[[Category: Katayama T]]
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[[Category: Wada, J.]]
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[[Category: Suzuki R]]
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[[Category: Abc transporter]]
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[[Category: Wada J]]
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[[Category: Human milk oligosacchalide]]
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[[Category: Mucin core-1]]
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[[Category: Sugar binding protein]]
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Current revision

The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-tetraose

PDB ID 2z8f

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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