1rmj

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[[Image:1rmj.png|left|200px]]
 
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==C-terminal domain of insulin-like growth factor (IGF) binding protein-6: structure and interaction with IGF-II==
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The line below this paragraph, containing "STRUCTURE_1rmj", creates the "Structure Box" on the page.
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<StructureSection load='1rmj' size='340' side='right'caption='[[1rmj]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1rmj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RMJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RMJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rmj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rmj OCA], [https://pdbe.org/1rmj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rmj RCSB], [https://www.ebi.ac.uk/pdbsum/1rmj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rmj ProSAT]</span></td></tr>
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{{STRUCTURE_1rmj| PDB=1rmj | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/IBP6_HUMAN IBP6_HUMAN] IGF-binding proteins prolong the half-life of the IGFs and have been shown to either inhibit or stimulate the growth promoting effects of the IGFs on cell culture. They alter the interaction of IGFs with their cell surface receptors.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rm/1rmj_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rmj ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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IGFs are important mediators of growth. IGF binding proteins (IGFBPs) 1-6 regulate IGF actions and have IGF-independent actions. The C-terminal domains of IGFBPs contribute to high-affinity IGF binding and modulation of IGF actions and confer some IGF-independent properties, but understanding how they achieve this has been constrained by the lack of a three-dimensional structure. We therefore determined the solution structure of the C-domain of IGFBP-6 using nuclear magnetic resonance (NMR). The domain consists of a thyroglobulin type 1 fold comprising an alpha-helix followed by a loop, a three-stranded antiparallel beta-sheet incorporating a second loop, and finally a disulfide-bonded flexible third loop. The IGF-II binding site on the C-domain was identified by examining NMR spectral changes upon complex formation. It consists of a largely hydrophobic surface patch involving the alpha-helix, the first beta-strand, and the first and second loops. The site was confirmed by mutagenesis of several residues, which resulted in decreased IGF binding affinity. The IGF-II binding site lies adjacent to surfaces likely to be involved in glycosaminoglycan binding of IGFBPs, which might explain their decreased IGF affinity when bound to glycosaminoglycans, and nuclear localization. Our structure provides a framework for understanding the roles of IGFBP C-domains in modulating IGF actions and conferring IGF-independent actions, as well as ultimately for the development of therapeutic IGF inhibitors for diseases including cancer.
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===C-terminal domain of insulin-like growth factor (IGF) binding protein-6: structure and interaction with IGF-II===
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C-terminal domain of insulin-like growth factor (IGF) binding protein-6: structure and interaction with IGF-II.,Headey SJ, Keizer DW, Yao S, Brasier G, Kantharidis P, Bach LA, Norton RS Mol Endocrinol. 2004 Nov;18(11):2740-50. Epub 2004 Aug 12. PMID:15308688<ref>PMID:15308688</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 1rmj" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_15308688}}, adds the Publication Abstract to the page
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*[[Insulin-like growth factor binding protein 3D structures|Insulin-like growth factor binding protein 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 15308688 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_15308688}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[1rmj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RMJ OCA].
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==Reference==
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<ref group="xtra">PMID:15308688</ref><ref group="xtra">PMID:15196913</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Bach, L A.]]
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[[Category: Large Structures]]
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[[Category: Brasier, G.]]
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[[Category: Bach LA]]
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[[Category: Headey, S J.]]
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[[Category: Brasier G]]
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[[Category: Kantharidis, P.]]
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[[Category: Headey SJ]]
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[[Category: Keizer, D W.]]
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[[Category: Kantharidis P]]
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[[Category: Norton, R S.]]
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[[Category: Keizer DW]]
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[[Category: Yao, S.]]
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[[Category: Norton RS]]
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[[Category: Hormone/growth factor complex]]
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[[Category: Yao S]]
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[[Category: Insulin-like growth factor binding protein]]
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Current revision

C-terminal domain of insulin-like growth factor (IGF) binding protein-6: structure and interaction with IGF-II

PDB ID 1rmj

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