This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2rn4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:33, 7 July 2021) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rn4.png|left|200px]]
 
-
<!--
+
==Solution structure of the alkaline proteinase inhibitor APRin from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_2rn4", creates the "Structure Box" on the page.
+
<StructureSection load='2rn4' size='340' side='right'caption='[[2rn4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2rn4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RN4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RN4 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">inh, aprI ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rn4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rn4 OCA], [https://pdbe.org/2rn4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rn4 RCSB], [https://www.ebi.ac.uk/pdbsum/2rn4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rn4 ProSAT]</span></td></tr>
-
{{STRUCTURE_2rn4| PDB=2rn4 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution structure of the alkaline proteinase inhibitor APRin from Pseudomonas aeruginosa===
+
[[https://www.uniprot.org/uniprot/INH_PSEAE INH_PSEAE]] Inhibitor of the alkaline protease. It forms a non-covalent bond with the protease and may prevent its autocatalytic cleavage in the periplasm (By similarity).
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
[[2rn4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RN4 OCA].
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rn/2rn4_consurf.spt"</scriptWhenChecked>
-
==Reference==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
<ref group="xtra">PMID:18214691</ref><ref group="xtra">PMID:15803404</ref><references group="xtra"/>
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Pseudomonas aeruginosa]]
+
</jmolCheckbox>
-
[[Category: Arumugam, S.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rn4 ConSurf].
-
[[Category: Gray, R D.]]
+
<div style="clear:both"></div>
-
[[Category: Lane, A N.]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Arumugam, S]]
 +
[[Category: Gray, R D]]
 +
[[Category: Lane, A N]]
[[Category: Hydrolase inhibitor]]
[[Category: Hydrolase inhibitor]]
[[Category: Metalloenzyme inhibitor]]
[[Category: Metalloenzyme inhibitor]]

Current revision

Solution structure of the alkaline proteinase inhibitor APRin from Pseudomonas aeruginosa

PDB ID 2rn4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools