2cbv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2cbv" [edit=sysop:move=sysop])
Current revision (14:12, 13 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cbv.png|left|200px]]
 
-
<!--
+
==Beta-glucosidase from Thermotoga maritima in complex with calystegine B2==
-
The line below this paragraph, containing "STRUCTURE_2cbv", creates the "Structure Box" on the page.
+
<StructureSection load='2cbv' size='340' side='right'caption='[[2cbv]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2cbv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CBV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CBV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CGB:CALYSTEGINE+B2'>CGB</scene></td></tr>
-
{{STRUCTURE_2cbv| PDB=2cbv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cbv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cbv OCA], [https://pdbe.org/2cbv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cbv RCSB], [https://www.ebi.ac.uk/pdbsum/2cbv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cbv ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BGLA_THEMA BGLA_THEMA]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/2cbv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cbv ConSurf].
 +
<div style="clear:both"></div>
-
===BETA-GLUCOSIDASE FROM THERMOTOGA MARITIMA IN COMPLEX WITH CALYSTEGINE B2===
+
==See Also==
-
 
+
*[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[2cbv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CBV OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:16628756</ref><ref group="xtra">PMID:17279749</ref><references group="xtra"/>
+
-
[[Category: Beta-glucosidase]]
+
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
-
[[Category: Davies, G J.]]
+
[[Category: Davies GJ]]
-
[[Category: Gloster, T M.]]
+
[[Category: Gloster TM]]
-
[[Category: Madsen, R.]]
+
[[Category: Madsen R]]
-
[[Category: Carbohydrate metabolism]]
+
-
[[Category: Cellulose degradation]]
+
-
[[Category: Family 1]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Glycoside hydrolase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Inhibitor]]
+
-
[[Category: Polysaccharide degradation]]
+
-
[[Category: Transition state mimic]]
+

Current revision

Beta-glucosidase from Thermotoga maritima in complex with calystegine B2

PDB ID 2cbv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools