1ao4

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[[Image:1ao4.png|left|200px]]
 
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==COBALT(III)-PEPLOMYCIN COMPLEX DETERMINED BY NMR STUDIES==
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The line below this paragraph, containing "STRUCTURE_1ao4", creates the "Structure Box" on the page.
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<StructureSection load='1ao4' size='340' side='right'caption='[[1ao4]], [[NMR_Ensembles_of_Models | 1 NMR models]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AO4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AO4 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">SOLUTION NMR, 1 model</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3CO:COBALT+(III)+ION'>3CO</scene>, <scene name='pdbligand=PEO:HYDROGEN+PEROXIDE'>PEO</scene>, <scene name='pdbligand=PMY:AGLYCON+OF+PEPLOMYCIN'>PMY</scene>, <scene name='pdbligand=3FM:3-O-FORMAMIDO-ALPHA-D-MANNOPYRANOSIDE'>3FM</scene>, <scene name='pdbligand=GUP:ALPHA-L-GULOPYRANOSIDE'>GUP</scene></td></tr>
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{{STRUCTURE_1ao4| PDB=1ao4 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ao4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ao4 OCA], [https://pdbe.org/1ao4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ao4 RCSB], [https://www.ebi.ac.uk/pdbsum/1ao4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ao4 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Pepleomycin (PEP) is a metalloglycopeptide that has stronger anticancer activity and less pulmonary toxicity than bleomycin (BLM). PEP, like BLM, exerts its action by binding to and degrading DNA in the presence of oxygen and certain metals. Obtaining detailed structural information of PEP and PEP-DNA complexes is crucial to understanding its anticancer activity. The structures of two green forms of cobalt-PEP species, HO2-Co(III)-PEP (denoted CoPEP) and deglycosylated HO2-Co(III)-PEP (denoted CodPEP) have been obtained by NOE restrained refinements. Earlier studies of the related HO2-Co(III)-BLM A2 proposed that two chiral conformers (form A or B) could exist with either the beta-aminoalanine primary amine (A,NH2) or the mannose carbamoyl nitrogen (M,NH2) as the axial ligand. Analysis of our NOESY data shows convincingly that form A is the most probable conformer with the mannose carbamoyl M,NH2 and the beta-aminoalanine primary amine A,NH2 as the axial ligands in CoPEP and CodPEP, respectively. The NOE cross-peaks resulting from the interactions between the N-terminus (i.e., the metal-binding domain) and the C-terminus of CoPEP and CodPEP have similar patterns, suggesting that they both adopt compact structures with the bithiazole group folded back over the N-terminus.
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===COBALT(III)-PEPLOMYCIN COMPLEX DETERMINED BY NMR STUDIES===
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Structures of cobalt(III)-pepleomycin and cobalt(III)-deglycopepleomycin (green forms) determined by NMR studies.,Caceres-Cortes J, Sugiyama H, Ikudome K, Saito I, Wang AH Eur J Biochem. 1997 Mar 15;244(3):818-28. PMID:9108252<ref>PMID:9108252</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_9108252}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 1ao4" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 9108252 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_9108252}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AO4 OCA].
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[[Category: Caceres-Cortes, J]]
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[[Category: Ikudome, K]]
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==Reference==
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[[Category: Saito, I]]
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<ref group="xtra">PMID:9108252</ref><references group="xtra"/>
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[[Category: Sugiyama, H]]
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[[Category: Caceres-Cortes, J.]]
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[[Category: Wang, A H.J]]
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[[Category: Ikudome, K.]]
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[[Category: Anticancer drug]]
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[[Category: Saito, I.]]
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[[Category: Bleomycin]]
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[[Category: Sugiyama, H.]]
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[[Category: Dna]]
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[[Category: Wang, A H.J.]]
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[[Category: Inhibitor]]
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[[Category: Pepleomycin]]
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[[Category: Peplomycin]]
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[[Category: Solution structure]]
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[[Category: Two-dimensional nmr]]

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COBALT(III)-PEPLOMYCIN COMPLEX DETERMINED BY NMR STUDIES

PDB ID 1ao4

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